esm2_t6_8m_qlora_binding_sites_v1 / pdb_structure_metrics.txt
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Create pdb_structure_metrics.txt
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Train:
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Dataset: GTP_Training.txt
Accuracy: 0.8374
Precision: 0.1140
Recall: 0.5597
F1 Score: 0.1895
AUC: 0.7035
MCC: 0.1978
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Dataset: GDP_Training.txt
Accuracy: 0.8472
Precision: 0.1575
Recall: 0.6431
F1 Score: 0.2531
AUC: 0.7494
MCC: 0.2646
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Dataset: FE_Training.txt
Accuracy: 0.8128
Precision: 0.0484
Recall: 0.5746
F1 Score: 0.0892
AUC: 0.6956
MCC: 0.1251
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Dataset: AMP_Training.txt
Accuracy: 0.7763
Precision: 0.0866
Recall: 0.5677
F1 Score: 0.1503
AUC: 0.6757
MCC: 0.1535
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Dataset: HEME_Training.txt
Accuracy: 0.8367
Precision: 0.1929
Recall: 0.3199
F1 Score: 0.2407
AUC: 0.6010
MCC: 0.1617
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Dataset: ATP_Training.txt
Accuracy: 0.8307
Precision: 0.1222
Recall: 0.5210
F1 Score: 0.1980
AUC: 0.6823
MCC: 0.1900
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Dataset: DNA_Training.txt
Accuracy: 0.8127
Precision: 0.1491
Recall: 0.2667
F1 Score: 0.1913
AUC: 0.5644
MCC: 0.1000
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Dataset: ADP_Training.txt
Accuracy: 0.8433
Precision: 0.1269
Recall: 0.5432
F1 Score: 0.2058
AUC: 0.6991
MCC: 0.2060
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Dataset: MN_Training.txt
Accuracy: 0.8098
Precision: 0.0407
Recall: 0.5969
F1 Score: 0.0762
AUC: 0.7048
MCC: 0.1182
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Dataset: ZN_Training.txt
Accuracy: 0.8071
Precision: 0.0371
Recall: 0.4854
F1 Score: 0.0689
AUC: 0.6487
MCC: 0.0908
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Dataset: MG_Training.txt
Accuracy: 0.8084
Precision: 0.0282
Recall: 0.4953
F1 Score: 0.0533
AUC: 0.6536
MCC: 0.0810
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Dataset: CA_Training.txt
Accuracy: 0.8180
Precision: 0.0254
Recall: 0.2637
F1 Score: 0.0464
AUC: 0.5456
MCC: 0.0309
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Test:
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Dataset: HEME_Validation.txt
Accuracy: 0.8702
Precision: 0.1827
Recall: 0.3052
F1 Score: 0.2285
AUC: 0.6067
MCC: 0.1690
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Dataset: GTP_Validation.txt
Accuracy: 0.7665
Precision: 0.1198
Recall: 0.6517
F1 Score: 0.2024
AUC: 0.7118
MCC: 0.2046
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Dataset: GDP_Validation.txt
Accuracy: 0.7885
Precision: 0.1469
Recall: 0.7835
F1 Score: 0.2474
AUC: 0.7861
MCC: 0.2772
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Dataset: FE_Validation.txt
Accuracy: 0.8219
Precision: 0.0443
Recall: 0.6167
F1 Score: 0.0827
AUC: 0.7206
MCC: 0.1299
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Dataset: MN_Validation.txt
Accuracy: 0.8022
Precision: 0.0376
Recall: 0.5612
F1 Score: 0.0705
AUC: 0.6833
MCC: 0.1054
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Dataset: AMP_Validation.txt
Accuracy: 0.7724
Precision: 0.0941
Recall: 0.6071
F1 Score: 0.1629
AUC: 0.6929
MCC: 0.1705
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Dataset: DNA_Validation.txt
Accuracy: 0.8643
Precision: 0.1184
Recall: 0.2169
F1 Score: 0.1532
AUC: 0.5600
MCC: 0.0910
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Dataset: ATP_Validation.txt
Accuracy: 0.8333
Precision: 0.1174
Recall: 0.5301
F1 Score: 0.1923
AUC: 0.6876
MCC: 0.1900
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Dataset: ADP_Validation.txt
Accuracy: 0.8338
Precision: 0.1048
Recall: 0.5423
F1 Score: 0.1756
AUC: 0.6929
MCC: 0.1830
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Dataset: ZN_Validation.txt
Accuracy: 0.8164
Precision: 0.0383
Recall: 0.4556
F1 Score: 0.0706
AUC: 0.6388
MCC: 0.0883
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Dataset: CA_Validation.txt
Accuracy: 0.8251
Precision: 0.0248
Recall: 0.2917
F1 Score: 0.0458
AUC: 0.5623
MCC: 0.0396
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Dataset: MG_Validation.txt
Accuracy: 0.8223
Precision: 0.0249
Recall: 0.3721
F1 Score: 0.0467
AUC: 0.5998
MCC: 0.0565
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