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README.md
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@@ -13,16 +13,16 @@ xTrimoPGLM is the open-source version of the latest protein language models towa
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We evaluated the xTrimoPGLM (xTMLM or xTCLM) and xTrimoPGLM(100B) models on two OOD test sets, one with sequence identity lower than 0.9 with the training set (<0.9 ID) and the other with sequence identity lower than 0.5 with the training set (<0.5 ID). Each OOD dataset comprises approximately 10,000 protein sequences. The MLM perplexity results, compared against ESM2-3B and ESM2-15B and the CLM perplexity againest ProGen2-xlarge (6.4B), are as follows (lower is better):
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| Model | ESM2(3B)| ESM2 (15B) | xTMLM (1B) | xTMLM (3B) | xTMLM (10B) |
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|:--------------------|:----------:|:----------:|:----------:|:----------:|:--------------------:|:--------------------:|:--------------------:|
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| < 0.9 ID | 7.7 | 7.3 | 9.3 | 7.8 | 7.6 |
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| < 0.5 ID | 11.5 | 11.0 | 13.5 | 11.9 | 11.6 |
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| Model | ProGen2-xlarge (6.4B) | xTCLM (1B) | xTCLM (3B) | xTCLM (7B) |
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|:--------------------|:----------:|:----------:|:----------:|:--------------------:|:--------------------:|:--------------------:|
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| < 0.9 ID | 9.7 | 9.8 | 9.3 | 8.9 | **8.
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| < 0.5 ID | 14.3 | 14.0 | 13.7 | 13.5 |
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## Downstream Protein Understanding Tasks Evaluation
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We evaluated the xTrimoPGLM (xTMLM or xTCLM) and xTrimoPGLM(100B) models on two OOD test sets, one with sequence identity lower than 0.9 with the training set (<0.9 ID) and the other with sequence identity lower than 0.5 with the training set (<0.5 ID). Each OOD dataset comprises approximately 10,000 protein sequences. The MLM perplexity results, compared against ESM2-3B and ESM2-15B and the CLM perplexity againest ProGen2-xlarge (6.4B), are as follows (lower is better):
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| Model | ESM2(3B)| ESM2 (15B) | xTMLM (1B) | xTMLM (3B) | xTMLM (10B) | xT (100B)-INT4 |
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|:--------------------|:----------:|:----------:|:----------:|:----------:|:--------------------:|:--------------------:|:--------------------:|
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| < 0.9 ID | 7.7 | 7.3 | 9.3 | 7.8 | 7.6 | **6.8** |
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| < 0.5 ID | 11.5 | 11.0 | 13.5 | 11.9 | 11.6 | **10.8** |
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| Model | ProGen2-xlarge (6.4B) | xTCLM (1B) | xTCLM (3B) | xTCLM (7B) | xT (100B)-INT4 |
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|:--------------------|:----------:|:----------:|:----------:|:--------------------:|:--------------------:|:--------------------:|
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| < 0.9 ID | 9.7 | 9.8 | 9.3 | 8.9 | **8.9** |
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| < 0.5 ID | 14.3 | 14.0 | 13.7 | 13.5 | **13.5** |
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## Downstream Protein Understanding Tasks Evaluation
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