Upload 10 files
Browse files- README.md +56 -0
- added_tokens.json +3 -0
- config.json +39 -0
- generation_config.json +7 -0
- gitattributes +34 -0
- merges.txt +0 -0
- pytorch_model.bin +3 -0
- special_tokens_map.json +18 -0
- tokenizer_config.json +34 -0
- vocab.json +0 -0
README.md
ADDED
@@ -0,0 +1,56 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
---
|
2 |
+
tags:
|
3 |
+
- medical
|
4 |
+
license: mit
|
5 |
+
datasets:
|
6 |
+
- Mohammed-Altaf/medical-instruction-120k
|
7 |
+
language:
|
8 |
+
- en
|
9 |
+
library_name: transformers
|
10 |
+
---
|
11 |
+
Please note that the chatbot is designed for research purposes only and is not intended for use in real medical settings. While the chatbot has been trained to provide accurate and helpful responses, it is not a substitute for professional medical advice, diagnosis, or treatment. The information provided by the chatbot should not be used to make medical decisions, and any health concerns should be addressed by a licensed healthcare provider.
|
12 |
+
|
13 |
+
## Quickstart
|
14 |
+
|
15 |
+
```python
|
16 |
+
import torch
|
17 |
+
from transformers import GPT2LMHeadModel, GPT2Tokenizer
|
18 |
+
|
19 |
+
|
20 |
+
path = "Mohammed-Altaf/Medical-ChatBot"
|
21 |
+
device = "cuda" if torch.cuda.is_available() else "cpu"
|
22 |
+
tokenizer = GPT2Tokenizer.from_pretrained(path)
|
23 |
+
model = GPT2LMHeadModel.from_pretrained(path).to(device)
|
24 |
+
|
25 |
+
prompt_input = (
|
26 |
+
"The conversation between human and AI assistant.\n"
|
27 |
+
"[|Human|] {input}\n"
|
28 |
+
"[|AI|]"
|
29 |
+
)
|
30 |
+
sentence = prompt_input.format_map({'input': "what is parkinson's disease?"})
|
31 |
+
inputs = tokenizer(sentence, return_tensors="pt").to(device)
|
32 |
+
|
33 |
+
with torch.no_grad():
|
34 |
+
beam_output = model.generate(**inputs,
|
35 |
+
min_new_tokens=1,
|
36 |
+
max_length=512,
|
37 |
+
num_beams=3,
|
38 |
+
repetition_penalty=1.2,
|
39 |
+
early_stopping=True,
|
40 |
+
eos_token_id=198
|
41 |
+
)
|
42 |
+
print(tokenizer.decode(beam_output[0], skip_special_tokens=True))
|
43 |
+
```
|
44 |
+
|
45 |
+
## Example Outputs
|
46 |
+
```
|
47 |
+
The conversation between human and AI assistant.
|
48 |
+
[|Human|] what is parkinson's disease?
|
49 |
+
[|AI|] Parkinson's disease is a neurodegenerative disorder that affects movement. It is caused by the loss of dopamine-producing cells in the brain.
|
50 |
+
```
|
51 |
+
|
52 |
+
```
|
53 |
+
The conversation between human and AI assistant.
|
54 |
+
[|Human|] what type of honey is best for a bad covid cough?
|
55 |
+
[|AI|] Manuka honey has been shown to have anti-inflammatory and antibacterial properties that can help alleviate symptoms of a bad covid cough.
|
56 |
+
```
|
added_tokens.json
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"[PAD]": 28895
|
3 |
+
}
|
config.json
ADDED
@@ -0,0 +1,39 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"_name_or_path": "biomedLM_baize/checkpoint-1000",
|
3 |
+
"activation_function": "gelu_new",
|
4 |
+
"architectures": [
|
5 |
+
"GPT2LMHeadModel"
|
6 |
+
],
|
7 |
+
"attn_pdrop": 0.1,
|
8 |
+
"bos_token_id": 28895,
|
9 |
+
"embd_pdrop": 0.1,
|
10 |
+
"eos_token_id": 28895,
|
11 |
+
"initializer_range": 0.02,
|
12 |
+
"layer_norm_epsilon": 1e-05,
|
13 |
+
"model_type": "gpt2",
|
14 |
+
"n_ctx": 1024,
|
15 |
+
"n_embd": 2560,
|
16 |
+
"n_head": 20,
|
17 |
+
"n_inner": null,
|
18 |
+
"n_layer": 32,
|
19 |
+
"n_positions": 1024,
|
20 |
+
"reorder_and_upcast_attn": false,
|
21 |
+
"resid_pdrop": 0.1,
|
22 |
+
"scale_attn_by_inverse_layer_idx": true,
|
23 |
+
"scale_attn_weights": true,
|
24 |
+
"summary_activation": null,
|
25 |
+
"summary_first_dropout": 0.1,
|
26 |
+
"summary_proj_to_labels": true,
|
27 |
+
"summary_type": "cls_index",
|
28 |
+
"summary_use_proj": true,
|
29 |
+
"task_specific_params": {
|
30 |
+
"text-generation": {
|
31 |
+
"do_sample": true,
|
32 |
+
"max_length": 50
|
33 |
+
}
|
34 |
+
},
|
35 |
+
"torch_dtype": "float32",
|
36 |
+
"transformers_version": "4.26.1",
|
37 |
+
"use_cache": false,
|
38 |
+
"vocab_size": 28896
|
39 |
+
}
|
generation_config.json
ADDED
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"_from_model_config": true,
|
3 |
+
"bos_token_id": 28895,
|
4 |
+
"eos_token_id": 28895,
|
5 |
+
"transformers_version": "4.26.1",
|
6 |
+
"use_cache": false
|
7 |
+
}
|
gitattributes
ADDED
@@ -0,0 +1,34 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
*.7z filter=lfs diff=lfs merge=lfs -text
|
2 |
+
*.arrow filter=lfs diff=lfs merge=lfs -text
|
3 |
+
*.bin filter=lfs diff=lfs merge=lfs -text
|
4 |
+
*.bz2 filter=lfs diff=lfs merge=lfs -text
|
5 |
+
*.ckpt filter=lfs diff=lfs merge=lfs -text
|
6 |
+
*.ftz filter=lfs diff=lfs merge=lfs -text
|
7 |
+
*.gz filter=lfs diff=lfs merge=lfs -text
|
8 |
+
*.h5 filter=lfs diff=lfs merge=lfs -text
|
9 |
+
*.joblib filter=lfs diff=lfs merge=lfs -text
|
10 |
+
*.lfs.* filter=lfs diff=lfs merge=lfs -text
|
11 |
+
*.mlmodel filter=lfs diff=lfs merge=lfs -text
|
12 |
+
*.model filter=lfs diff=lfs merge=lfs -text
|
13 |
+
*.msgpack filter=lfs diff=lfs merge=lfs -text
|
14 |
+
*.npy filter=lfs diff=lfs merge=lfs -text
|
15 |
+
*.npz filter=lfs diff=lfs merge=lfs -text
|
16 |
+
*.onnx filter=lfs diff=lfs merge=lfs -text
|
17 |
+
*.ot filter=lfs diff=lfs merge=lfs -text
|
18 |
+
*.parquet filter=lfs diff=lfs merge=lfs -text
|
19 |
+
*.pb filter=lfs diff=lfs merge=lfs -text
|
20 |
+
*.pickle filter=lfs diff=lfs merge=lfs -text
|
21 |
+
*.pkl filter=lfs diff=lfs merge=lfs -text
|
22 |
+
*.pt filter=lfs diff=lfs merge=lfs -text
|
23 |
+
*.pth filter=lfs diff=lfs merge=lfs -text
|
24 |
+
*.rar filter=lfs diff=lfs merge=lfs -text
|
25 |
+
*.safetensors filter=lfs diff=lfs merge=lfs -text
|
26 |
+
saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
27 |
+
*.tar.* filter=lfs diff=lfs merge=lfs -text
|
28 |
+
*.tflite filter=lfs diff=lfs merge=lfs -text
|
29 |
+
*.tgz filter=lfs diff=lfs merge=lfs -text
|
30 |
+
*.wasm filter=lfs diff=lfs merge=lfs -text
|
31 |
+
*.xz filter=lfs diff=lfs merge=lfs -text
|
32 |
+
*.zip filter=lfs diff=lfs merge=lfs -text
|
33 |
+
*.zst filter=lfs diff=lfs merge=lfs -text
|
34 |
+
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
merges.txt
ADDED
The diff for this file is too large to render.
See raw diff
|
|
pytorch_model.bin
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:2cac4bd8d32e7fce74c7cc3dc5bba17fefa7c26942f36916557ee9a3a3d7f0ba
|
3 |
+
size 10410689701
|
special_tokens_map.json
ADDED
@@ -0,0 +1,18 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"bos_token": {
|
3 |
+
"content": "<|endoftext|>",
|
4 |
+
"lstrip": false,
|
5 |
+
"normalized": true,
|
6 |
+
"rstrip": false,
|
7 |
+
"single_word": false
|
8 |
+
},
|
9 |
+
"eos_token": "[PAD]",
|
10 |
+
"pad_token": "[PAD]",
|
11 |
+
"unk_token": {
|
12 |
+
"content": "<|endoftext|>",
|
13 |
+
"lstrip": false,
|
14 |
+
"normalized": true,
|
15 |
+
"rstrip": false,
|
16 |
+
"single_word": false
|
17 |
+
}
|
18 |
+
}
|
tokenizer_config.json
ADDED
@@ -0,0 +1,34 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"add_bos_token": false,
|
3 |
+
"add_prefix_space": false,
|
4 |
+
"bos_token": {
|
5 |
+
"__type": "AddedToken",
|
6 |
+
"content": "<|endoftext|>",
|
7 |
+
"lstrip": false,
|
8 |
+
"normalized": true,
|
9 |
+
"rstrip": false,
|
10 |
+
"single_word": false
|
11 |
+
},
|
12 |
+
"eos_token": {
|
13 |
+
"__type": "AddedToken",
|
14 |
+
"content": "<|endoftext|>",
|
15 |
+
"lstrip": false,
|
16 |
+
"normalized": true,
|
17 |
+
"rstrip": false,
|
18 |
+
"single_word": false
|
19 |
+
},
|
20 |
+
"errors": "replace",
|
21 |
+
"model_max_length": 1024,
|
22 |
+
"name_or_path": "biomedLM_baize/checkpoint-1000",
|
23 |
+
"pad_token": null,
|
24 |
+
"special_tokens_map_file": null,
|
25 |
+
"tokenizer_class": "GPT2Tokenizer",
|
26 |
+
"unk_token": {
|
27 |
+
"__type": "AddedToken",
|
28 |
+
"content": "<|endoftext|>",
|
29 |
+
"lstrip": false,
|
30 |
+
"normalized": true,
|
31 |
+
"rstrip": false,
|
32 |
+
"single_word": false
|
33 |
+
}
|
34 |
+
}
|
vocab.json
ADDED
The diff for this file is too large to render.
See raw diff
|
|