Push model using huggingface_hub.
Browse files- config.json +32 -1
config.json
CHANGED
@@ -1,5 +1,27 @@
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{
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"main_config": {
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"model_config": {
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"class_mappings": [
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"12S_bin-1",
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@@ -3888,6 +3910,12 @@
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"vocab_size": 17,
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"window": 2
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},
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"train_config": {
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"batch_per_epoch": 99,
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"batch_size": 512,
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@@ -3910,6 +3938,9 @@
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"shuffle_exp": false,
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"top_k": 10,
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"warmup_epoch": 10
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-
}
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}
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}
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{
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"main_config": {
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"cross_val": true,
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"device_number": 1,
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"inference": false,
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"inference_settings": {
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"infere_original_testset": false,
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"model_path": "/nfs/home/yat_ldap/VS_Projects/TransfoRNA-Framework/models/tcga/TransfoRNA_FULL/sub_class/Seq/ckpt/model_params_tcga.pt",
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"sequences_path": "/data/hbdx_ldap_local/analysis/data/sncRNA/test.h5ad"
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},
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"log_embedds": true,
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"log_logits": false,
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"model": {
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"skorch_model": {
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"_target_": "transforna.Net",
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"batch_size": 512,
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"criterion": "transforna.LossFunction",
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"device": "cuda",
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"iterator_train__shuffle": true,
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"max_epochs": 3000,
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"module": "transforna.GeneEmbeddModel",
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"optimizer": "torch.optim.AdamW"
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}
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},
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"model_config": {
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"class_mappings": [
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"12S_bin-1",
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"vocab_size": 17,
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"window": 2
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},
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"model_name": "seq",
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"num_replicates": 1,
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"path_to_id_models": "/nfs/home/yat_ldap/VS_Projects/TransfoRNA-Framework/models/tcga/",
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"seed": 0,
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"task": "tcga",
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"tensorboard": false,
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"train_config": {
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"batch_per_epoch": 99,
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"batch_size": 512,
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"shuffle_exp": false,
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"top_k": 10,
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"warmup_epoch": 10
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},
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"train_split": true,
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"trained_on": "full",
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"valid_size": 0.15
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}
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}
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