MalloryWittwerEPFL
commited on
Commit
•
b3201aa
1
Parent(s):
ad1895a
Fix broken model
Browse files- .gitignore +135 -0
- requirements.txt +8 -0
- test_model.py +12 -0
- test_model_before_push.py +30 -0
- train.py +3 -3
.gitignore
ADDED
@@ -0,0 +1,135 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Byte-compiled / optimized / DLL files
|
2 |
+
__pycache__/
|
3 |
+
*.py[cod]
|
4 |
+
*$py.class
|
5 |
+
|
6 |
+
# C extensions
|
7 |
+
*.so
|
8 |
+
|
9 |
+
# Distribution / packaging
|
10 |
+
.Python
|
11 |
+
build/
|
12 |
+
develop-eggs/
|
13 |
+
dist/
|
14 |
+
downloads/
|
15 |
+
eggs/
|
16 |
+
.eggs/
|
17 |
+
lib/
|
18 |
+
lib64/
|
19 |
+
parts/
|
20 |
+
sdist/
|
21 |
+
var/
|
22 |
+
wheels/
|
23 |
+
share/python-wheels/
|
24 |
+
*.egg-info/
|
25 |
+
.installed.cfg
|
26 |
+
*.egg
|
27 |
+
MANIFEST
|
28 |
+
|
29 |
+
# PyInstaller
|
30 |
+
# Usually these files are written by a python script from a template
|
31 |
+
# before PyInstaller builds the exe, so as to inject date/other infos into it.
|
32 |
+
*.manifest
|
33 |
+
*.spec
|
34 |
+
|
35 |
+
# Installer logs
|
36 |
+
pip-log.txt
|
37 |
+
pip-delete-this-directory.txt
|
38 |
+
|
39 |
+
# Unit test / coverage reports
|
40 |
+
htmlcov/
|
41 |
+
.tox/
|
42 |
+
.nox/
|
43 |
+
.coverage
|
44 |
+
.coverage.*
|
45 |
+
.cache
|
46 |
+
nosetests.xml
|
47 |
+
coverage.xml
|
48 |
+
*.cover
|
49 |
+
*.py,cover
|
50 |
+
.hypothesis/
|
51 |
+
.pytest_cache/
|
52 |
+
cover/
|
53 |
+
|
54 |
+
# Translations
|
55 |
+
*.mo
|
56 |
+
*.pot
|
57 |
+
|
58 |
+
# Django stuff:
|
59 |
+
*.log
|
60 |
+
local_settings.py
|
61 |
+
db.sqlite3
|
62 |
+
db.sqlite3-journal
|
63 |
+
|
64 |
+
# Flask stuff:
|
65 |
+
instance/
|
66 |
+
.webassets-cache
|
67 |
+
|
68 |
+
# Scrapy stuff:
|
69 |
+
.scrapy
|
70 |
+
|
71 |
+
# Sphinx documentation
|
72 |
+
docs/_build/
|
73 |
+
|
74 |
+
# PyBuilder
|
75 |
+
.pybuilder/
|
76 |
+
target/
|
77 |
+
|
78 |
+
# Jupyter Notebook
|
79 |
+
.ipynb_checkpoints
|
80 |
+
|
81 |
+
# IPython
|
82 |
+
profile_default/
|
83 |
+
ipython_config.py
|
84 |
+
|
85 |
+
.pdm.toml
|
86 |
+
|
87 |
+
# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
|
88 |
+
__pypackages__/
|
89 |
+
|
90 |
+
# Celery stuff
|
91 |
+
celerybeat-schedule
|
92 |
+
celerybeat.pid
|
93 |
+
|
94 |
+
# SageMath parsed files
|
95 |
+
*.sage.py
|
96 |
+
|
97 |
+
# Environments
|
98 |
+
.env
|
99 |
+
.venv
|
100 |
+
env/
|
101 |
+
venv/
|
102 |
+
ENV/
|
103 |
+
env.bak/
|
104 |
+
venv.bak/
|
105 |
+
|
106 |
+
# Spyder project settings
|
107 |
+
.spyderproject
|
108 |
+
.spyproject
|
109 |
+
|
110 |
+
# Rope project settings
|
111 |
+
.ropeproject
|
112 |
+
|
113 |
+
# mkdocs documentation
|
114 |
+
/site
|
115 |
+
|
116 |
+
# mypy
|
117 |
+
.mypy_cache/
|
118 |
+
.dmypy.json
|
119 |
+
dmypy.json
|
120 |
+
|
121 |
+
# Pyre type checker
|
122 |
+
.pyre/
|
123 |
+
|
124 |
+
# pytype static type analyzer
|
125 |
+
.pytype/
|
126 |
+
|
127 |
+
# Cython debug symbols
|
128 |
+
cython_debug/
|
129 |
+
|
130 |
+
notebooks/
|
131 |
+
old/
|
132 |
+
.vscode/
|
133 |
+
*.ckpt
|
134 |
+
|
135 |
+
*.jpg
|
requirements.txt
ADDED
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
albumentations==1.1.0
|
2 |
+
opencv-python-headless==4.5.5.64
|
3 |
+
optuna==3.0.4
|
4 |
+
pandas==1.3.5
|
5 |
+
pytorch-lightning<=1.5.10
|
6 |
+
timm==0.5.4
|
7 |
+
wandb==0.12.16
|
8 |
+
opencv-python
|
test_model.py
ADDED
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
import os
|
2 |
+
import cv2
|
3 |
+
|
4 |
+
os.environ["PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION"] = "python"
|
5 |
+
|
6 |
+
from transformers import AutoModelForImageClassification
|
7 |
+
|
8 |
+
if __name__ == "__main__":
|
9 |
+
cetacean_classifier = AutoModelForImageClassification.from_pretrained("Saving-Willy/cetacean-classifier", trust_remote_code=True)
|
10 |
+
img = cv2.imread("tail.jpg")
|
11 |
+
out = cetacean_classifier(img)
|
12 |
+
print(out)
|
test_model_before_push.py
ADDED
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
"""
|
2 |
+
Script used to load a custom model and push it to HuggingFace.
|
3 |
+
Doc: https://huggingface.co/docs/transformers/custom_models#writing-a-custom-model
|
4 |
+
"""
|
5 |
+
import os
|
6 |
+
import json
|
7 |
+
import cv2
|
8 |
+
|
9 |
+
os.environ["PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION"] = "python"
|
10 |
+
|
11 |
+
from configuration_cetacean_classifier import (
|
12 |
+
CetaceanClassifierConfig,
|
13 |
+
)
|
14 |
+
from modeling_cetacean_classifier import (
|
15 |
+
CetaceanClassifierModelForImageClassification,
|
16 |
+
)
|
17 |
+
|
18 |
+
with open("original_model_config.json", "r") as file:
|
19 |
+
config= json.load(file)
|
20 |
+
|
21 |
+
cetacean_config = CetaceanClassifierConfig(**config)
|
22 |
+
cetacean_classifier = CetaceanClassifierModelForImageClassification(cetacean_config)
|
23 |
+
|
24 |
+
cetacean_classifier.model.load_from_checkpoint("last.ckpt")
|
25 |
+
|
26 |
+
img = cv2.imread("tail.jpg")
|
27 |
+
|
28 |
+
out = cetacean_classifier(img)
|
29 |
+
print(out)
|
30 |
+
|
train.py
CHANGED
@@ -5,10 +5,10 @@ import timm
|
|
5 |
import torch
|
6 |
from pytorch_lightning import LightningDataModule, LightningModule, Trainer
|
7 |
|
8 |
-
from
|
9 |
# from .dataset import WhaleDataset, load_df
|
10 |
-
from
|
11 |
-
from
|
12 |
|
13 |
|
14 |
class SphereClassifier(LightningModule):
|
|
|
5 |
import torch
|
6 |
from pytorch_lightning import LightningDataModule, LightningModule, Trainer
|
7 |
|
8 |
+
from config import Config, load_config
|
9 |
# from .dataset import WhaleDataset, load_df
|
10 |
+
from metric_learning import ArcFaceLossAdaptiveMargin, ArcMarginProductSubcenter, GeM
|
11 |
+
from utils import WarmupCosineLambda, map_dict, topk_average_precision
|
12 |
|
13 |
|
14 |
class SphereClassifier(LightningModule):
|