alenatz/BioBERT-BioCause
Browse files
README.md
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---
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license: apache-2.0
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base_model: bert-base-cased
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tags:
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- generated_from_trainer
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metrics:
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- accuracy
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- f1
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- recall
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- precision
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model-index:
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- name: biobert-biocause-trainer
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# biobert-biocause-trainer
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This model is a fine-tuned version of [bert-base-cased](https://huggingface.co/bert-base-cased) on the None dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.1681
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- Accuracy: 0.9485
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- F1: 0.9040
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- Recall: 0.9511
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- Precision: 0.8614
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 3e-05
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- train_batch_size: 8
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- eval_batch_size: 8
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- seed: 42
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- num_epochs: 2
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Accuracy | F1 | Recall | Precision |
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|:-------------:|:-----:|:----:|:---------------:|:--------:|:------:|:------:|:---------:|
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| 0.6094 | 0.16 | 50 | 0.5106 | 0.7701 | 0.6246 | 0.7492 | 0.5355 |
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| 0.5744 | 0.32 | 100 | 0.4291 | 0.8132 | 0.6898 | 0.8139 | 0.5986 |
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| 0.5282 | 0.48 | 150 | 0.3735 | 0.7963 | 0.6995 | 0.9290 | 0.5610 |
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| 0.4704 | 0.64 | 200 | 0.4850 | 0.8965 | 0.7724 | 0.6877 | 0.8808 |
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| 0.4809 | 0.8 | 250 | 0.2955 | 0.9074 | 0.8192 | 0.8218 | 0.8166 |
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| 0.3985 | 0.96 | 300 | 0.2699 | 0.8829 | 0.8014 | 0.9259 | 0.7064 |
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| 0.347 | 1.13 | 350 | 0.2695 | 0.9275 | 0.8587 | 0.8628 | 0.8547 |
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| 0.3729 | 1.29 | 400 | 0.2227 | 0.9320 | 0.8723 | 0.9101 | 0.8374 |
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| 0.4059 | 1.45 | 450 | 0.2130 | 0.9420 | 0.8894 | 0.9132 | 0.8668 |
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| 0.3023 | 1.61 | 500 | 0.1996 | 0.9477 | 0.8989 | 0.9117 | 0.8865 |
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| 0.2676 | 1.77 | 550 | 0.1814 | 0.9521 | 0.9074 | 0.9196 | 0.8955 |
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| 0.4202 | 1.93 | 600 | 0.1702 | 0.9452 | 0.8987 | 0.9511 | 0.8517 |
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### Framework versions
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- Transformers 4.37.2
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- Pytorch 2.3.1
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- Datasets 2.19.1
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- Tokenizers 0.15.1
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config.json
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{
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"_name_or_path": "bert-base-cased",
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"architectures": [
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"BertForSequenceClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"gradient_checkpointing": false,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"torch_dtype": "float32",
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"transformers_version": "4.37.2",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 28996
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}
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logs/events.out.tfevents.1719902954.Alenas-MacBook-Pro-2.local.29817.0
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version https://git-lfs.github.com/spec/v1
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oid sha256:a1ea54cc02e7679e6ffef27581f0522c5bc7ea790a479de4381cadbbe9863bf7
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size 12211
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logs/events.out.tfevents.1719903868.Alenas-MacBook-Pro-2.local.29817.1
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version https://git-lfs.github.com/spec/v1
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oid sha256:9303673dd3de0e189e3b70663edb2c5f7295cdf486b4e813124fa22b47d3f261
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size 560
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:2d157e2dfda5ce668b3133110784fb19fdb78104f0592a8e415fd96fc3cfc3c7
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size 433270768
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training_args.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:41282d2c2b667eab21f9cc6764ef8466b253e65e22e4b39d8f63068c335ad295
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size 4664
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