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  1. biomed-vlp-eval.svg +1 -0
  2. biomed_clip_example.ipynb +0 -0
  3. example_data/biomed_image_classification_example_data/H_and_E_histopathology.jpg +0 -0
  4. example_data/biomed_image_classification_example_data/IHC_histopathology.jpg +0 -0
  5. example_data/biomed_image_classification_example_data/adenocarcinoma_histopathology.jpg +0 -0
  6. example_data/biomed_image_classification_example_data/bone_X-ray.jpg +0 -0
  7. example_data/biomed_image_classification_example_data/brain_MRI.jpg +0 -0
  8. example_data/biomed_image_classification_example_data/chest_X-ray.jpg +0 -0
  9. example_data/biomed_image_classification_example_data/covid_line_chart.png +0 -0
  10. example_data/biomed_image_classification_example_data/pie_chart.png +0 -0
  11. example_data/biomed_image_classification_example_data/squamous_cell_carcinoma_histopathology.jpeg +0 -0
  12. open_clip_config.json +31 -0
  13. open_clip_pytorch_model.bin +3 -0
  14. special_tokens_map.json +7 -0
  15. tokenizer.json +0 -0
  16. tokenizer_config.json +15 -0
  17. vocab.txt +0 -0
biomed-vlp-eval.svg ADDED
biomed_clip_example.ipynb ADDED
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example_data/biomed_image_classification_example_data/H_and_E_histopathology.jpg ADDED
example_data/biomed_image_classification_example_data/IHC_histopathology.jpg ADDED
example_data/biomed_image_classification_example_data/adenocarcinoma_histopathology.jpg ADDED
example_data/biomed_image_classification_example_data/bone_X-ray.jpg ADDED
example_data/biomed_image_classification_example_data/brain_MRI.jpg ADDED
example_data/biomed_image_classification_example_data/chest_X-ray.jpg ADDED
example_data/biomed_image_classification_example_data/covid_line_chart.png ADDED
example_data/biomed_image_classification_example_data/pie_chart.png ADDED
example_data/biomed_image_classification_example_data/squamous_cell_carcinoma_histopathology.jpeg ADDED
open_clip_config.json ADDED
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+ {
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+ "model_cfg": {
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+ "vision_cfg": {
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+ "timm_model_name": "vit_base_patch16_224",
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+ "timm_proj": "linear",
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+ "image_size": 224
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+ "text_cfg": {
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+ "hf_model_name": "microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract",
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+ "hf_tokenizer_name": "microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract",
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+ "proj": "mlp",
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open_clip_pytorch_model.bin ADDED
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special_tokens_map.json ADDED
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tokenizer.json ADDED
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tokenizer_config.json ADDED
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+ {
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+ "clean_up_tokenization_spaces": true,
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vocab.txt ADDED
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