license.txt

FupBERTModel
© Battelle Memorial Institute 2023
Made available under the GNU General Public License v 2.0

	GNU GENERAL PUBLIC LICENSE
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		3rd party tools included in FupBERTModel
FupBERTModel includes the following open source software:
			PyTorch 2.0.1
			From PyTorch:

Copyright (c) 2016-     Facebook, Inc            (Adam Paszke)
Copyright (c) 2014-     Facebook, Inc            (Soumith Chintala)
Copyright (c) 2011-2014 Idiap Research Institute (Ronan Collobert)
Copyright (c) 2012-2014 Deepmind Technologies    (Koray Kavukcuoglu)
Copyright (c) 2011-2012 NEC Laboratories America (Koray Kavukcuoglu)
Copyright (c) 2011-2013 NYU                      (Clement Farabet)
Copyright (c) 2006-2010 NEC Laboratories America (Ronan Collobert, Leon Bottou, Iain Melvin, Jason Weston)
Copyright (c) 2006      Idiap Research Institute (Samy Bengio)
Copyright (c) 2001-2004 Idiap Research Institute (Ronan Collobert, Samy Bengio, Johnny Mariethoz)

From Caffe2:

Copyright (c) 2016-present, Facebook Inc. All rights reserved.

All contributions by Facebook:
Copyright (c) 2016 Facebook Inc.

All contributions by Google:
Copyright (c) 2015 Google Inc.
All rights reserved.

All contributions by Yangqing Jia:
Copyright (c) 2015 Yangqing Jia
All rights reserved.

All contributions by Kakao Brain:
Copyright 2019-2020 Kakao Brain

All contributions by Cruise LLC:
Copyright (c) 2022 Cruise LLC.
All rights reserved.

All contributions from Caffe:
Copyright(c) 2013, 2014, 2015, the respective contributors
All rights reserved.

All other contributions:
Copyright(c) 2015, 2016 the respective contributors
All rights reserved.

Caffe2 uses a copyright model similar to Caffe: each contributor holds
copyright over their contributions to Caffe2. The project versioning records
all such contribution and copyright details. If a contributor wants to further
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1. Redistributions of source code must retain the above copyright
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3. Neither the names of Facebook, Deepmind Technologies, NYU, NEC Laboratories America
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POSSIBILITY OF SUCH DAMAGE.


FupBERTModel includes the following open source software:
			transformer.py
		Copyright 2023 The Tensor2Tensor Authors
		Licensed under the Apache License 2.0

				Apache License
                           Version 2.0, January 2004
                        http://www.apache.org/licenses/

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   END OF TERMS AND CONDITIONS
 
		FupBERTModel includes the following open source software:
			rdkit 2023_03_2(Q1 2023) Release
			BSD 3-Clause License

	Copyright (c) 2006-2015, Rational Discovery LLC, Greg Landrum, and Julie Penzotti and others
All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:

1. Redistributions of source code must retain the above copyright notice, this
   list of conditions and the following disclaimer.

2. Redistributions in binary form must reproduce the above copyright notice,
   this list of conditions and the following disclaimer in the documentation
   and/or other materials provided with the distribution.

3. Neither the name of the copyright holder nor the names of its
   contributors may be used to endorse or promote products derived from
   this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

FupBERTModel includes the followig open source software:
			optuna v3.2.0
			MIT License

		opyright (c) 2018 Preferred Networks, Inc.

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
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copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.


==

Optuna contains code that is licensed by third-party developers.

==
SciPy


The Optuna contains the codes from SciPy project.


Copyright (c) 2001-2002 Enthought, Inc. 2003-2022, SciPy Developers.
All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions
are met:

1. Redistributions of source code must retain the above copyright
   notice, this list of conditions and the following disclaimer.

2. Redistributions in binary form must reproduce the above
   copyright notice, this list of conditions and the following
   disclaimer in the documentation and/or other materials provided
   with the distribution.

3. Neither the name of the copyright holder nor the names of its
   contributors may be used to endorse or promote products derived
   from this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.


==

fdlibm

 Copyright (C) 1993 by Sun Microsystems, Inc. All rights reserved.

 Developed at SunPro, a Sun Microsystems, Inc. business.
 Permission to use, copy, modify, and distribute this
 software is freely granted, provided that this notice
 is preserved.