Training in progress, epoch 1
Browse files- .gitattributes +1 -0
- config.json +148 -0
- pytorch_model.bin +3 -0
- special_tokens_map.json +7 -0
- tokenizer.json +0 -0
- tokenizer_config.json +59 -0
- training_args.bin +3 -0
- vocab.txt +3 -0
.gitattributes
CHANGED
@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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*.zst filter=lfs diff=lfs merge=lfs -text
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*tfevents* filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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*.zst filter=lfs diff=lfs merge=lfs -text
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*tfevents* filter=lfs diff=lfs merge=lfs -text
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vocab.txt filter=lfs diff=lfs merge=lfs -text
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config.json
ADDED
@@ -0,0 +1,148 @@
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{
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"_name_or_path": "imvladikon/alephbertgimmel-base-512",
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"architectures": [
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"BertForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"gradient_checkpointing": false,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "TEST",
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"1": "OTHER",
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"2": "ANATOMY",
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"3": "REFERRAL",
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"4": "MEDICAL_PROCEDURE",
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"5": "PROTECTED_HEALTH_INFORMATION_EMAIL",
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"6": "SYMPTOM",
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"7": "PULSE",
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"8": "PROTECTED_HEALTH_INFORMATION_PROFESSION",
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"9": "PHYSICAL_EXAM",
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"10": "RISK_FACTOR",
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"11": "PROTECTED_HEALTH_INFORMATION_GENDER",
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"12": "MEDICATION",
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"13": "0",
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"14": "TREATMENT",
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"15": "VITAL_SIGN",
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"16": "MEDICAL_HISTORY",
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"17": "STAGE",
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"18": "MEDICAL_EXAM",
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"19": "FOLLOW_UP",
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"20": "CLINICAL_FINDINGS",
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"21": "DOSAGE",
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"22": "MEASUREMENT",
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"23": "PROTECTED_HEALTH_INFORMATION_PHONE_NUMBER",
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"24": "LAB_FINDING",
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"25": "NEXT_VISIT",
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"26": "DURATION",
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"27": "QUANTITY",
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"28": "ALLERGIES",
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"29": "PROGNOSIS",
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"30": "DIAGNOSIS",
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"31": "EXAMINATION",
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"32": "FREQUENCY",
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"33": "OBSERVATION",
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"34": "AFFECTED_BODY_PARTS",
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"35": "TEMPERATURE",
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"36": "LIFESTYLE",
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"37": "ONSET",
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"38": "PROTECTED_HEALTH_INFORMATION_MEDICAL_RECORD",
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"39": "PROTECTED_HEALTH_INFORMATION_NAME",
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"40": "BLOOD_PRESSURE",
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"41": "IMAGING",
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"42": "RECOMMENDATION",
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"43": "PROTECTED_HEALTH_INFORMATION_AGE",
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"44": "HEART_RATE",
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"45": "FINDINGS",
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"46": "GENDER",
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"47": "OUTCOME",
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"48": "FAMILY_HISTORY",
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"49": "MEDICAL_DEVICE",
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"50": "SPECIALIST",
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"51": "BLOOD_SUGAR",
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"52": "OTHER_DATES",
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"53": "RESPIRATORY_RATE",
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"54": "MEDICAL_CONDITION",
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"55": "PROCEDURE",
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"56": "DEMOGRAPHICS",
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"57": "PROTECTED_HEALTH_INFORMATION_DATE",
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"58": "PROTECTED_HEALTH_INFORMATION_LOCATION"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"0": 13,
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"AFFECTED_BODY_PARTS": 34,
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"ALLERGIES": 28,
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"ANATOMY": 2,
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"BLOOD_PRESSURE": 40,
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"BLOOD_SUGAR": 51,
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"CLINICAL_FINDINGS": 20,
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"DEMOGRAPHICS": 56,
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"DIAGNOSIS": 30,
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"DOSAGE": 21,
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"DURATION": 26,
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"EXAMINATION": 31,
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"FAMILY_HISTORY": 48,
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"FINDINGS": 45,
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"FOLLOW_UP": 19,
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"FREQUENCY": 32,
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"GENDER": 46,
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"HEART_RATE": 44,
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"IMAGING": 41,
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"LAB_FINDING": 24,
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"LIFESTYLE": 36,
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"MEASUREMENT": 22,
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"MEDICAL_CONDITION": 54,
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"MEDICAL_DEVICE": 49,
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"MEDICAL_EXAM": 18,
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"MEDICAL_HISTORY": 16,
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"MEDICAL_PROCEDURE": 4,
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"MEDICATION": 12,
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"NEXT_VISIT": 25,
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"OBSERVATION": 33,
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"ONSET": 37,
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"OTHER": 1,
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"OTHER_DATES": 52,
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"OUTCOME": 47,
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"PHYSICAL_EXAM": 9,
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"PROCEDURE": 55,
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"PROGNOSIS": 29,
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"PROTECTED_HEALTH_INFORMATION_AGE": 43,
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"PROTECTED_HEALTH_INFORMATION_DATE": 57,
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"PROTECTED_HEALTH_INFORMATION_EMAIL": 5,
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"PROTECTED_HEALTH_INFORMATION_GENDER": 11,
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"PROTECTED_HEALTH_INFORMATION_LOCATION": 58,
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"PROTECTED_HEALTH_INFORMATION_MEDICAL_RECORD": 38,
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"PROTECTED_HEALTH_INFORMATION_NAME": 39,
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"PROTECTED_HEALTH_INFORMATION_PHONE_NUMBER": 23,
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"PROTECTED_HEALTH_INFORMATION_PROFESSION": 8,
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"PULSE": 7,
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"QUANTITY": 27,
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"RECOMMENDATION": 42,
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"REFERRAL": 3,
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126 |
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"RESPIRATORY_RATE": 53,
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127 |
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"RISK_FACTOR": 10,
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128 |
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"SPECIALIST": 50,
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"STAGE": 17,
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"SYMPTOM": 6,
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"TEMPERATURE": 35,
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"TEST": 0,
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"TREATMENT": 14,
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"VITAL_SIGN": 15
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"torch_dtype": "float32",
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"transformers_version": "4.34.1",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 128000
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}
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pytorch_model.bin
ADDED
@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:f1f68651a4bf51c2ca194dea412435c356f08d124f7860e625e6bc99ccedffc5
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size 735268201
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special_tokens_map.json
ADDED
@@ -0,0 +1,7 @@
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{
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"cls_token": "[CLS]",
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"mask_token": "[MASK]",
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"unk_token": "[UNK]"
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}
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tokenizer.json
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The diff for this file is too large to render.
See raw diff
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tokenizer_config.json
ADDED
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{
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"added_tokens_decoder": {
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"0": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"1": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"2": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"3": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"4": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"clean_up_tokenization_spaces": true,
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"cls_token": "[CLS]",
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"do_basic_tokenize": true,
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"do_lower_case": true,
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"mask_token": "[MASK]",
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"max_length": 512,
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"model_max_length": 1000000000000000019884624838656,
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"never_split": null,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"truncation": true,
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"unk_token": "[UNK]"
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}
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training_args.bin
ADDED
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version https://git-lfs.github.com/spec/v1
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oid sha256:61fe9f540a399562e56b339c88165467052130e8cac34c208b38c405b444ec90
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size 4091
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vocab.txt
ADDED
@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:4c8eb3d9f7ef0b8f036227785d1dbdc90926ba6816d3899736832d912ccd52e2
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size 1296919
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