ctheodoris madhavanvenkatesh commited on
Commit
47e0ef8
1 Parent(s): 4c9dda5

allow model_type valid options to take params model_type : {"Pretrained", "GeneClassifier", "CellClassifier", "MTLCellClassifier", "MTLCellClassifier-Quantized"} (#390)

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- allow model_type valid options to take params model_type : {"Pretrained", "GeneClassifier", "CellClassifier", "MTLCellClassifier", "MTLCellClassifier-Quantized"} (f8687d834ba074caf734cf29424902e42a8a8b18)


Co-authored-by: Madhavan Venkatesh <madhavanvenkatesh@users.noreply.huggingface.co>

Files changed (1) hide show
  1. geneformer/in_silico_perturber.py +1 -1
geneformer/in_silico_perturber.py CHANGED
@@ -60,7 +60,7 @@ class InSilicoPerturber:
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  "genes_to_perturb": {"all", list},
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  "combos": {0, 1},
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  "anchor_gene": {None, str},
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- "model_type": {"Pretrained", "GeneClassifier", "CellClassifier"},
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  "num_classes": {int},
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  "emb_mode": {"cls", "cell", "cls_and_gene", "cell_and_gene"},
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  "cell_emb_style": {"mean_pool"},
 
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  "genes_to_perturb": {"all", list},
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  "combos": {0, 1},
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  "anchor_gene": {None, str},
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+ "model_type": {"Pretrained", "GeneClassifier", "CellClassifier", "MTLCellClassifier", "MTLCellClassifier-Quantized"},
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  "num_classes": {int},
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  "emb_mode": {"cls", "cell", "cls_and_gene", "cell_and_gene"},
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  "cell_emb_style": {"mean_pool"},