update readme

README.md

@@ -12,34 +12,34 @@ configs:
     path: "affinity-data-combined.parquet"
   - split: davis
     path: "davis.csv"
-  - split: davis-filtered
+  - split: davis_filtered
     path: "davis-filtered.csv"
   - split: kiba
     path: "kiba.csv"
-  - split: pdbbind-2020-combined
+  - split: pdbbind_2020_combined
     path: "pdbbind-2020-combined.csv"
-  - split: pdbbind-2020-refined
+  - split: pdbbind_2020_refined
     path: "pdbbind-2020-refined.csv"
-  - split: bindingdb-ic50
+  - split: bindingdb_ic50
     path: "bindingdb-ic50.csv"
-  - split: bindingdb-ki
+  - split: bindingdb_ki
     path: "bindingdb-ki.csv"
-  - split: bindingdb-ki-filtered
+  - split: bindingdb_ki_filtered
     path: "bindingdb-ki-filtered.csv"
-  - split: bindingdb-kd
+  - split: bindingdb_kd
     path: "bindingdb-kd.csv"
   - split: glaser
     path: "glaser.csv"
 ---
 
 ## Data Sources
-bindingdb-ic50.csv: https://tdcommons.ai/ (tdc python package)
-bindingdb-kd.csv: https://tdcommons.ai/ (tdc python package)
-bindingdb-kd-filtered.csv: filtered manually (see standardize_data.ipynb)
-bindingdb-ki.csv: https://tdcommons.ai/ (tdc python package)
+bindingdb_ic50.csv: https://tdcommons.ai/ (tdc python package)
+bindingdb_kd.csv: https://tdcommons.ai/ (tdc python package)
+bindingdb_kd_filtered.csv: filtered manually (see standardize_data.ipynb)
+bindingdb_ki.csv: https://tdcommons.ai/ (tdc python package)
 davis.csv: https://tdcommons.ai/ (tdc python package)
-davis-filtered.csv: https://www.kaggle.com/datasets/christang0002/davis-and-kiba
+davis_filtered.csv: https://www.kaggle.com/datasets/christang0002/davis-and-kiba
 kiba.csv: https://tdcommons.ai/ (tdc python package)
-pdbbind-2020-combined.csv: https://www.pdbbind.org.cn/
-pdbbind-2020-refined.csv: https://www.pdbbind.org.cn/
+pdbbind_2020_combined.csv: https://www.pdbbind.org.cn/
+pdbbind_2020_refined.csv: https://www.pdbbind.org.cn/
 glaser.csv: https://huggingface.co/datasets/jglaser/binding_affinity