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@@ -26,4 +26,78 @@ configs:
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  path: data/valid-*
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  - split: test
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  path: data/test-*
 
 
 
 
 
 
 
 
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  ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  path: data/valid-*
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  - split: test
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  path: data/test-*
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+ license: apache-2.0
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+ task_categories:
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+ - token-classification
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+ tags:
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+ - chemistry
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+ - biology
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+ size_categories:
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+ - 10K<n<100K
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  ---
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+
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+
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+ # Dataset Card for Stability Stability Dataset
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+
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+ ### Dataset Summary
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+
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+ The Stability Stability task is to predict the concentration of protease at which a protein can retain its folded state. Protease, being integral to numerous biological processes, bears significant relevance and a profound comprehension of protein stability during protease interaction can offer immense value, especially in the creation of novel therapeutics.
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+
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+ ## Dataset Structure
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+
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+ ### Data Instances
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+ For each instance, there is a string representing the protein sequence and a float number indicating the stability score. See the [stability prediction dataset viewer](https://huggingface.co/datasets/Bo1015/stability_prediction/viewer) to explore more examples.
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+
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+ ```
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+ {'seq':'MEHVIDNFDNIDKCLKCGKPIKVVKLKYIKKKIENIPNSHLINFKYCSKCKRENVIENL'
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+ 'label':0.17}
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+ ```
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+
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+ The average for the `seq` and the `label` are provided below:
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+
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+ | Feature | Mean Count |
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+ | ---------- | ---------------- |
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+ | seq | 45 |
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+ | label | 0.34 |
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+
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+
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+
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+ ### Data Fields
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+
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+ - `seq`: a string containing the protein sequence
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+ - `label`: a float number indicating the stability score of each sequence.
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+
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+ ### Data Splits
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+
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+ The secondary structure prediction dataset has 3 splits: _train_, _valid_, and _test_. Below are the statistics of the dataset.
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+
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+ | Dataset Split | Number of Instances in Split |
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+ | ------------- | ------------------------------------------- |
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+ | Train | 53,614 |
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+ | Valid | 2,512 |
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+ | Test | 12,851 |
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+
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+ ### Source Data
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+
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+ #### Initial Data Collection and Normalization
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+
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+ The dataset applied in this task is initially sourced from [Rocklin et al](https://www.science.org/doi/10.1126/science.aan0693) and subsequently collected within the [TAPE](https://github.com/songlab-cal/tape).
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+
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+ ### Licensing Information
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+
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+ The dataset is released under the [Apache-2.0 License](http://www.apache.org/licenses/LICENSE-2.0).
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+
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+ ### Citation
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+ If you find our work useful, please consider citing the following paper:
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+
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+ ```
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+ @misc{chen2024xtrimopglm,
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+ title={xTrimoPGLM: unified 100B-scale pre-trained transformer for deciphering the language of protein},
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+ author={Chen, Bo and Cheng, Xingyi and Li, Pan and Geng, Yangli-ao and Gong, Jing and Li, Shen and Bei, Zhilei and Tan, Xu and Wang, Boyan and Zeng, Xin and others},
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+ year={2024},
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+ eprint={2401.06199},
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+ archivePrefix={arXiv},
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+ primaryClass={cs.CL},
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+ note={arXiv preprint arXiv:2401.06199}
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+ }
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+ ```