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"""HEAD-QA: A Healthcare Dataset for Complex Reasoning.""" |
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import json |
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import os |
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import datasets |
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_CITATION = """\ |
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@inproceedings{vilares-gomez-rodriguez-2019-head, |
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title = "{HEAD}-{QA}: A Healthcare Dataset for Complex Reasoning", |
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author = "Vilares, David and |
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G{\'o}mez-Rodr{\'i}guez, Carlos", |
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booktitle = "Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics", |
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month = jul, |
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year = "2019", |
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address = "Florence, Italy", |
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publisher = "Association for Computational Linguistics", |
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url = "https://www.aclweb.org/anthology/P19-1092", |
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doi = "10.18653/v1/P19-1092", |
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pages = "960--966", |
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abstract = "We present HEAD-QA, a multi-choice question answering testbed to encourage research on complex reasoning. The questions come from exams to access a specialized position in the Spanish healthcare system, and are challenging even for highly specialized humans. We then consider monolingual (Spanish) and cross-lingual (to English) experiments with information retrieval and neural techniques. We show that: (i) HEAD-QA challenges current methods, and (ii) the results lag well behind human performance, demonstrating its usefulness as a benchmark for future work.", |
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} |
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""" |
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_DESCRIPTION = """\ |
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HEAD-QA is a multi-choice HEAlthcare Dataset. The questions come from exams to access a specialized position in the |
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Spanish healthcare system, and are challenging even for highly specialized humans. They are designed by the Ministerio |
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de Sanidad, Consumo y Bienestar Social. |
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The dataset contains questions about the following topics: medicine, nursing, psychology, chemistry, pharmacology and biology. |
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""" |
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_HOMEPAGE = "https://aghie.github.io/head-qa/" |
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_LICENSE = "Custom license" |
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_URL = "https://drive.google.com/uc?export=download&confirm=t&id=1a_95N5zQQoUCq8IBNVZgziHbeM-QxG2t" |
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_DIRS = {"es": "HEAD", "en": "HEAD_EN"} |
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class HeadQA(datasets.GeneratorBasedBuilder): |
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"""HEAD-QA: A Healthcare Dataset for Complex Reasoning""" |
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VERSION = datasets.Version("1.1.0") |
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BUILDER_CONFIGS = [ |
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datasets.BuilderConfig( |
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name="es", version=VERSION, description="Spanish HEAD dataset" |
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), |
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datasets.BuilderConfig( |
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name="en", version=VERSION, description="English HEAD dataset" |
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), |
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] |
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DEFAULT_CONFIG_NAME = "es" |
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def _info(self): |
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return datasets.DatasetInfo( |
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description=_DESCRIPTION, |
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features=datasets.Features( |
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{ |
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"name": datasets.Value("string"), |
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"year": datasets.Value("string"), |
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"category": datasets.Value("string"), |
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"qid": datasets.Value("int32"), |
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"qtext": datasets.Value("string"), |
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"ra": datasets.Value("int32"), |
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"answers": [ |
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{ |
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"aid": datasets.Value("int32"), |
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"atext": datasets.Value("string"), |
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} |
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], |
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} |
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), |
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supervised_keys=None, |
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homepage=_HOMEPAGE, |
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license=_LICENSE, |
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citation=_CITATION, |
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) |
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def _split_generators(self, dl_manager): |
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"""Returns SplitGenerators.""" |
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data_dir = dl_manager.download_and_extract(_URL) |
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dir = _DIRS[self.config.name] |
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data_lang_dir = os.path.join(data_dir, dir) |
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return [ |
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datasets.SplitGenerator( |
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name=datasets.Split.TRAIN, |
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gen_kwargs={ |
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"data_dir": data_dir, |
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"filepath": os.path.join(data_lang_dir, f"train_{dir}.json"), |
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}, |
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), |
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datasets.SplitGenerator( |
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name=datasets.Split.TEST, |
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gen_kwargs={ |
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"data_dir": data_dir, |
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"filepath": os.path.join(data_lang_dir, f"test_{dir}.json"), |
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}, |
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), |
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datasets.SplitGenerator( |
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name=datasets.Split.VALIDATION, |
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gen_kwargs={ |
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"data_dir": data_dir, |
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"filepath": os.path.join(data_lang_dir, f"dev_{dir}.json"), |
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}, |
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), |
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] |
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def _generate_examples(self, data_dir, filepath): |
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"""Yields examples.""" |
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with open(filepath, encoding="utf-8") as f: |
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head_qa = json.load(f) |
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for exam_id, exam in enumerate(head_qa["exams"]): |
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content = head_qa["exams"][exam] |
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name = content["name"].strip() |
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year = content["year"].strip() |
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category = content["category"].strip() |
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for question in content["data"]: |
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qid = int(question["qid"].strip()) |
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qtext = question["qtext"].strip() |
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ra = int(question["ra"].strip()) |
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aids = [answer["aid"] for answer in question["answers"]] |
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atexts = [answer["atext"].strip() for answer in question["answers"]] |
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answers = [ |
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{"aid": aid, "atext": atext} for aid, atext in zip(aids, atexts) |
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] |
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id_ = f"{exam_id}_{qid}" |
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yield id_, { |
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"name": name, |
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"year": year, |
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"category": category, |
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"qid": qid, |
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"qtext": qtext, |
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"ra": ra, |
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"answers": answers, |
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} |