update

sub-0006/raw_data/rename.ipynb

@@ -1,161 +0,0 @@
-{
- "cells": [
-  {
-   "cell_type": "code",
-   "execution_count": 1,
-   "metadata": {},
-   "outputs": [
-    {
-     "data": {
-      "text/plain": [
-       "['sub-0006_task-shape_run-27_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-27_bold.json',\n",
-       " 'sub-0006_task-shape_run-16_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-16_bold.json',\n",
-       " 'sub-0006_task-shape_run-1_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-1_bold.json',\n",
-       " 'sub-0006_task-shape_run-28_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-28_bold.json',\n",
-       " 'sub-0006_task-shape_run-2_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-2_bold.json',\n",
-       " 'sub-0006_task-shape_run-29_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-29_bold.json',\n",
-       " 'sub-0006_task-shape_run-3_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-3_bold.json',\n",
-       " 'sub-0006_task-shape_run-30_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-30_bold.json',\n",
-       " 'sub-0006_task-shape_run-19_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-19_bold.json',\n",
-       " 'sub-0006_task-shape_run-4_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-4_bold.json',\n",
-       " 'sub-0006_task-shape_run-31_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-31_bold.json',\n",
-       " 'sub-0006_task-shape_run-17_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-17_bold.json',\n",
-       " 'sub-0006_task-shape_run-5_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-5_bold.json',\n",
-       " 'sub-0006_task-shape_run-32_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-32_bold.json',\n",
-       " 'sub-0006_task-shape_run-18_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-18_bold.json',\n",
-       " 'sub-0006_task-shape_run-6_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-6_bold.json',\n",
-       " 'sub-0006_task-shape_run-20_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-20_bold.json',\n",
-       " 'sub-0006_task-shape_run-7_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-7_bold.json',\n",
-       " 'sub-0006_task-shape_run-21_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-21_bold.json',\n",
-       " 'sub-0006_task-shape_run-8_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-8_bold.json',\n",
-       " 'sub-0006_task-shape_run-22_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-22_bold.json',\n",
-       " 'sub-0006_task-shape_run-23_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-23_bold.json',\n",
-       " 'sub-0006_task-shape_run-24_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-24_bold.json',\n",
-       " 'sub-0006_task-shape_run-9_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-9_bold.json',\n",
-       " 'sub-0006_task-shape_run-25_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-25_bold.json',\n",
-       " 'sub-0006_task-shape_run-10_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-10_bold.json',\n",
-       " 'sub-0006_task-shape_run-26_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-26_bold.json',\n",
-       " 'sub-0006_task-shape_run-11_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-11_bold.json',\n",
-       " 'sub-0006_task-shape_run-12_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-12_bold.json',\n",
-       " 'sub-0006_task-shape_run-13_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-13_bold.json',\n",
-       " 'sub-0006_task-shape_run-14_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-14_bold.json',\n",
-       " 'sub-0006_task-shape_run-15_bold.nii.gz',\n",
-       " 'sub-0006_task-shape_run-15_bold.json']"
-      ]
-     },
-     "execution_count": 1,
-     "metadata": {},
-     "output_type": "execute_result"
-    }
-   ],
-   "source": [
-    "import os\n",
-    "files = os.listdir(\"/home/ubuntu/add_disk/dcm2bids/BIDS/sub-0006/func\")\n",
-    "files"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 4,
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "for i in range(32):\n",
-    "    index = i+1\n",
-    "    oldindex = i+1\n",
-    "    if index<=16:\n",
-    "        index+=16\n",
-    "    else:\n",
-    "        index-=16\n",
-    "    oldname = 'sub-0006_task-shape_run-{}_bold.json'.format(oldindex)\n",
-    "    newname = 'tmp_sub-0006_task-shape_run-{}_bold.json'.format(index)\n",
-    "    # new_name = 'sub-0006_task-shape_run-{}_bold.json'.format()\n",
-    "    os.system(\"mv func/{} func/{}\".format(oldname,newname))\n",
-    "    # print(\"mv func/{} func/{}\".format(oldname,newname))"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 10,
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "for i in range(4):\n",
-    "    index = i+1\n",
-    "    oldindex = i+1\n",
-    "    if index<=2:\n",
-    "        index+=2\n",
-    "    else:\n",
-    "        index-=2\n",
-    "    oldname = 'sub-0006_fmap-{}_phasediff.nii.gz'.format(oldindex)\n",
-    "    newname = 'tmp_sub-0006_fmap-{}_phasediff.nii.gz'.format(index)\n",
-    "    # new_name = 'sub-0006_task-shape_run-{}_bold.json'.format()\n",
-    "    os.system(\"mv fmap/{} fmap/{}\".format(oldname,newname))\n",
-    "    # print(\"mv fmap/{} fmap/{}\".format(oldname,newname))"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 13,
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "files = os.listdir(\"/home/ubuntu/add_disk/dcm2bids/BIDS/sub-0006/func\")\n",
-    "for file in files:\n",
-    "    os.system(\"mv func/{} func/{}\".format(file, file.replace(\"tmp_\",\"\")))"
-   ]
-  }
- ],
- "metadata": {
-  "kernelspec": {
-   "display_name": "Python 3",
-   "language": "python",
-   "name": "python3"
-  },
-  "language_info": {
-   "codemirror_mode": {
-    "name": "ipython",
-    "version": 3
-   },
-   "file_extension": ".py",
-   "mimetype": "text/x-python",
-   "name": "python",
-   "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython3",
-   "version": "3.8.19"
-  }
- },
- "nbformat": 4,
- "nbformat_minor": 2
-}