feat: add chromatin access support

agro-nt-tasks.py

@@ -4,13 +4,9 @@
 """TODO: Add a description here."""
 
 
-import csv
-import json
 import os
 from typing import List
 from Bio import SeqIO
-import numpy as np
-
 import datasets
 
 
@@ -57,14 +53,13 @@ _TASK_NAMES =  ['poly_a.arabidopsis_thaliana',
                 'gene_exp.solanum_lycopersicum',
                 'gene_exp.zea_mays',
                 'gene_exp.arabidopsis_thaliana',
-                'chromatin_access.arabidopis_thaliana',
-                'chromatin_access.sorghum_bicolor',
-                'chromatin_access.oryza_sativa_ZS97_RS2',
                 'chromatin_access.oryza_sativa_MH63_RS2',
-                'chromatin_access.zea_mays',
-                'chromatin_access.brachypodium_distachyon',
                 'chromatin_access.setaria_italica',
-                ]
+                'chromatin_access.oryza_sativa_ZS97_RS2',
+                'chromatin_access.arabidopis_thaliana',
+                'chromatin_access.brachypodium_distachyon',
+                'chromatin_access.sorghum_bicolor',
+                'chromatin_access.zea_mays',]
 
 
 _TASK_INFO = {'poly_a':{'type': 'binary', 'val_set':False},
@@ -117,6 +112,8 @@ class AgroNtTasks(datasets.GeneratorBasedBuilder):
             feature_dit["label"] = datasets.Value("float32")
         elif self.config.task_type == 'multi_regression':
             feature_dit['labels'] = [datasets.Value("float32")]
+        elif self.config.task_type == 'multi_label':
+            feature_dit['labels'] = [datasets.Value("int8")]
 
         features = datasets.Features(feature_dit)