| Residue conformations ------------------------------------------- | |
| A27 : U C3p_endo anti | |
| A28 : C C3p_endo anti | |
| A29 : A C3p_endo anti | |
| A30 : G C3p_endo anti | |
| A31 : A C3p_endo anti | |
| A32 : C C3p_endo anti | |
| A33 : U C4p_exo anti | |
| A34 : U O4p_endo anti | |
| A35 : U C1p_exo anti | |
| A36 : U O4p_endo anti | |
| A37 : A O4p_endo anti | |
| A38 : A C3p_endo anti | |
| A39 : U C3p_endo anti | |
| A40 : C C3p_endo anti | |
| A41 : U C3p_endo anti | |
| A42 : G C3p_endo anti | |
| A43 : A C3p_endo anti | |
| Adjacent stackings ---------------------------------------------- | |
| A27-A28 : adjacent_5p upward | |
| A28-A29 : adjacent_5p upward | |
| A29-A30 : adjacent_5p upward | |
| A30-A31 : adjacent_5p upward | |
| A31-A32 : adjacent_5p upward | |
| A32-A33 : adjacent_5p upward | |
| A38-A39 : adjacent_5p upward | |
| A39-A40 : adjacent_5p upward | |
| A40-A41 : adjacent_5p upward | |
| A41-A42 : adjacent_5p upward | |
| A42-A43 : adjacent_5p upward | |
| Non-Adjacent stackings ------------------------------------------ | |
| A29-A42 : outward | |
| Number of stackings = 12 | |
| Number of adjacent stackings = 11 | |
| Number of non adjacent stackings = 1 | |
| Base-pairs ------------------------------------------------------ | |
| A27-A43 : U-A Ww/Ww pairing antiparallel cis XX | |
| A28-A42 : C-G Ww/Ww pairing antiparallel cis XIX | |
| A29-A41 : A-U Ww/Ww pairing antiparallel cis XX | |
| A30-A40 : G-C Ww/Ww pairing antiparallel cis XIX | |
| A31-A39 : A-U Ww/Ww pairing antiparallel cis XX | |
| A32-A38 : C-A Ww/Wh pairing antiparallel cis one_hbond 75 | |
| A36-A37 : U-A O2P/Hh O2P/Hh adjacent_5p pairing | |