diff --git a/.gitmodules b/.gitmodules index 48659b60b4bb417bd9b6d2ef35f996706161f7c4..335f9f5cf5e146bde30a18cabdaf9c9b055129fd 100644 --- a/.gitmodules +++ b/.gitmodules @@ -1,24 +1,24 @@ [submodule "library/egg-discrimination/code/EGG"] - path = data/egg-discrimination/code/repo + path = systems/egg-discrimination/code/repo url = https://github.com/facebookresearch/EGG [submodule "library/generalizations-mu-goodman/code/repo"] - path = data/generalizations-mu-goodman/code/repo + path = systems/generalizations-mu-goodman/code/repo url = https://github.com/brendon-boldt/emergent-generalization [submodule "library/ec-at-scale/emergent_communication_at_scale"] - path = data/ec-at-scale/code/emergent_communication_at_scale + path = systems/ec-at-scale/code/emergent_communication_at_scale url = https://github.com/brendon-boldt/emergent_communication_at_scale [submodule "library/corpus-transfer-yao-et-al/repo"] - path = data/corpus-transfer-yao-et-al/code/repo + path = systems/corpus-transfer-yao-et-al/code/repo url = https://github.com/brendon-boldt/ec-nl [submodule "library/rlupus/repo"] - path = data/rlupus/code/repo + path = systems/rlupus/code/repo url = https://github.com/brendon-boldt/rl_werewolf [submodule "library/comon-iccv/code/repo"] path = library/comon-iccv/code/repo url = https://github.com/saimwani/CoMON [submodule "library/babyai-sr/code/repo"] - path = data/babyai-sr/code/repo + path = systems/babyai-sr/code/repo url = https://github.com/brendon-boldt/babyai_sr [submodule "data/nav-to-center/code/filex-emergent-language"] - path = data/nav-to-center/code/repo + path = systems/nav-to-center/code/repo url = https://github.com/brendon-boldt/filex-emergent-language diff --git a/data/babyai-sr/code/.gitignore b/systems/babyai-sr/code/.gitignore similarity index 100% rename from data/babyai-sr/code/.gitignore rename to systems/babyai-sr/code/.gitignore diff --git a/data/babyai-sr/code/environment.editable.yml 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a/data/rlupus/data/9-player.run-0/corpus.json b/systems/rlupus/data/9-player.run-0/corpus.json similarity index 100% rename from data/rlupus/data/9-player.run-0/corpus.json rename to systems/rlupus/data/9-player.run-0/corpus.json diff --git a/data/rlupus/data/9-player.run-0/corpus.jsonl b/systems/rlupus/data/9-player.run-0/corpus.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-0/corpus.jsonl rename to systems/rlupus/data/9-player.run-0/corpus.jsonl diff --git a/data/rlupus/data/9-player.run-0/corpus.structured.jsonl b/systems/rlupus/data/9-player.run-0/corpus.structured.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-0/corpus.structured.jsonl rename to systems/rlupus/data/9-player.run-0/corpus.structured.jsonl diff --git a/data/rlupus/data/9-player.run-0/metadata.json b/systems/rlupus/data/9-player.run-0/metadata.json similarity index 100% rename from data/rlupus/data/9-player.run-0/metadata.json rename to systems/rlupus/data/9-player.run-0/metadata.json diff --git a/data/rlupus/data/9-player.run-1/corpus.json b/systems/rlupus/data/9-player.run-1/corpus.json similarity index 100% rename from data/rlupus/data/9-player.run-1/corpus.json rename to systems/rlupus/data/9-player.run-1/corpus.json diff --git a/data/rlupus/data/9-player.run-1/corpus.jsonl b/systems/rlupus/data/9-player.run-1/corpus.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-1/corpus.jsonl rename to systems/rlupus/data/9-player.run-1/corpus.jsonl diff --git a/data/rlupus/data/9-player.run-1/corpus.structured.jsonl b/systems/rlupus/data/9-player.run-1/corpus.structured.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-1/corpus.structured.jsonl rename to systems/rlupus/data/9-player.run-1/corpus.structured.jsonl diff --git a/data/rlupus/data/9-player.run-1/metadata.json b/systems/rlupus/data/9-player.run-1/metadata.json similarity index 100% rename from data/rlupus/data/9-player.run-1/metadata.json rename to systems/rlupus/data/9-player.run-1/metadata.json diff --git a/data/rlupus/data/9-player.run-2/corpus.json b/systems/rlupus/data/9-player.run-2/corpus.json similarity index 100% rename from data/rlupus/data/9-player.run-2/corpus.json rename to systems/rlupus/data/9-player.run-2/corpus.json diff --git a/data/rlupus/data/9-player.run-2/corpus.jsonl b/systems/rlupus/data/9-player.run-2/corpus.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-2/corpus.jsonl rename to systems/rlupus/data/9-player.run-2/corpus.jsonl diff --git a/data/rlupus/data/9-player.run-2/corpus.structured.jsonl b/systems/rlupus/data/9-player.run-2/corpus.structured.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-2/corpus.structured.jsonl rename to systems/rlupus/data/9-player.run-2/corpus.structured.jsonl diff --git a/data/rlupus/data/9-player.run-2/metadata.json b/systems/rlupus/data/9-player.run-2/metadata.json similarity index 100% rename from data/rlupus/data/9-player.run-2/metadata.json rename to systems/rlupus/data/9-player.run-2/metadata.json diff --git a/data/rlupus/data/9-player.run-3/corpus.json b/systems/rlupus/data/9-player.run-3/corpus.json similarity index 100% rename from data/rlupus/data/9-player.run-3/corpus.json rename to systems/rlupus/data/9-player.run-3/corpus.json diff --git a/data/rlupus/data/9-player.run-3/corpus.jsonl b/systems/rlupus/data/9-player.run-3/corpus.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-3/corpus.jsonl rename to systems/rlupus/data/9-player.run-3/corpus.jsonl diff --git a/data/rlupus/data/9-player.run-3/corpus.structured.jsonl b/systems/rlupus/data/9-player.run-3/corpus.structured.jsonl similarity index 100% rename from data/rlupus/data/9-player.run-3/corpus.structured.jsonl rename to systems/rlupus/data/9-player.run-3/corpus.structured.jsonl diff --git a/data/rlupus/data/9-player.run-3/metadata.json b/systems/rlupus/data/9-player.run-3/metadata.json similarity index 100% rename from data/rlupus/data/9-player.run-3/metadata.json rename to systems/rlupus/data/9-player.run-3/metadata.json diff --git a/data/rlupus/metadata.json b/systems/rlupus/metadata.json similarity index 100% rename from data/rlupus/metadata.json rename to systems/rlupus/metadata.json diff --git a/data/rlupus/metadata.yml b/systems/rlupus/metadata.yml similarity index 100% rename from data/rlupus/metadata.yml rename to systems/rlupus/metadata.yml diff --git a/util/analysis/run.py b/util/analysis/run.py index 606a2326d943ea68e1b4418f2063890fc38af5a9..222aadf32b951a6575c583dd1cf445828d2766d1 100644 --- a/util/analysis/run.py +++ b/util/analysis/run.py @@ -52,7 +52,7 @@ def path_to_name(path: Path) -> str: def main() -> None: - paths = list(Path("./data").glob("*/data/**/corpus.jsonl")) + paths = list(Path("./systems").glob("*/data/**/corpus.jsonl")) funcs = [joblib.delayed(analyze_data)(path) for path in paths] parallel = joblib.Parallel(n_jobs=-1, return_as="generator")(funcs) results = list(tqdm(parallel, total=len(funcs))) diff --git a/util/jsonl2json.sh b/util/jsonl2json.sh index cf4b2f228fa196d93122fb1cfd6ac56fddc08025..e17b34212f5be1cb3d350a80476e563e2ab9a16e 100755 --- a/util/jsonl2json.sh +++ b/util/jsonl2json.sh @@ -3,5 +3,9 @@ shopt -s globstar for x in **/corpus.jsonl; do - cat $x | jq -sc > $(dirname $x)/$(basename $x .jsonl).json; + cat $x | jq -sc > ${x%jsonl}json; +done + +for x in systems/*/metadata.yml; do + cat $x | yq -sc > ${x%yml}json; done diff --git a/util/validate.py b/util/validate.py index e6e0cb29c2acc56090cdb9a54d815d0a3d28ddf4..3338bfad34e8028802f40a7656935ba6ec5ba1f2 100644 --- a/util/validate.py +++ b/util/validate.py @@ -60,7 +60,7 @@ class SystemMetadata(BaseModel): for k in v.keys(): validate_variant(f"{path}/data/{k}") # Check that all variants on the filesystem are listed in the metadata. - for var in Path(path).glob("data/*"): + for var in Path(path).glob("systems/*"): if var.name not in v.keys(): logging.warning( f'Directory "{path}/data/{var}" found but not listed in metadata.' @@ -90,7 +90,7 @@ class SystemLevelMetadata(BaseModel): def main() -> None: - paths = list(Path(".").glob("data/*")) + paths = list(Path(".").glob("systems/*")) for path in paths: try: md_path = path / "metadata.yml"