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Update README.md

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  1. README.md +7 -7
README.md CHANGED
@@ -49,7 +49,7 @@ dataset_info:
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  dtype: string
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  - name: CAS RN
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  dtype: string
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- - name: GHS
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  dtype:
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  class_label:
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  names:
@@ -90,7 +90,7 @@ dataset_info:
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  dtype: string
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  - name: CAS RN
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  dtype: string
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- - name: GHS
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  dtype:
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  class_label:
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  names:
@@ -155,11 +155,11 @@ and inspecting the loaded dataset
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  >>> Corr_Neg
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  DatasetDict({
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  test: Dataset({
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- features: ['Name', 'Synonym', 'CAS RN', 'GHS', 'Detailed Page', 'Evidence', 'OECD TG 404', 'Data Source', 'Frequency', 'SMILES', 'SMILES URL', 'SMILES Source', 'Canonical SMILES', 'Split'],
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  num_rows: 181
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  })
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  train: Dataset({
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- features: ['Name', 'Synonym', 'CAS RN', 'GHS', 'Detailed Page', 'Evidence', 'OECD TG 404', 'Data Source', 'Frequency', 'SMILES', 'SMILES URL', 'SMILES Source', 'Canonical SMILES', 'Split'],
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  num_rows: 1755
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  })
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  })
@@ -192,7 +192,7 @@ then load, featurize, split, fit, and evaluate the catboost model
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  "name": "cat_boost_classifier",
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  "config": {
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  "x_features": ['SMILES::morgan', 'SMILES::maccs_rdkit'],
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- "y_features": ['GHS']}})
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  model.train(split_featurised_dataset["train"])
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  preds = model.predict(split_featurised_dataset["test"])
@@ -200,8 +200,8 @@ then load, featurize, split, fit, and evaluate the catboost model
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  classification_suite = load_suite("classification")
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  scores = classification_suite.compute(
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- references=split_featurised_dataset["test"]['GHS'],
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- predictions=preds["cat_boost_classifier::GHS"])
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  ### Data splits
 
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  dtype: string
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  - name: CAS RN
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  dtype: string
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+ - name: Y
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  dtype:
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  class_label:
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  names:
 
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  dtype: string
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  - name: CAS RN
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  dtype: string
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+ - name: Y
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  dtype:
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  class_label:
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  names:
 
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  >>> Corr_Neg
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  DatasetDict({
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  test: Dataset({
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+ features: ['Name', 'Synonym', 'CAS RN', 'Y', 'Detailed Page', 'Evidence', 'OECD TG 404', 'Data Source', 'Frequency', 'SMILES', 'SMILES URL', 'SMILES Source', 'Canonical SMILES', 'Split'],
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  num_rows: 181
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  })
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  train: Dataset({
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+ features: ['Name', 'Synonym', 'CAS RN', 'Y', 'Detailed Page', 'Evidence', 'OECD TG 404', 'Data Source', 'Frequency', 'SMILES', 'SMILES URL', 'SMILES Source', 'Canonical SMILES', 'Split'],
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  num_rows: 1755
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  })
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  })
 
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  "name": "cat_boost_classifier",
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  "config": {
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  "x_features": ['SMILES::morgan', 'SMILES::maccs_rdkit'],
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+ "y_features": ['Y']}})
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  model.train(split_featurised_dataset["train"])
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  preds = model.predict(split_featurised_dataset["test"])
 
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  classification_suite = load_suite("classification")
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  scores = classification_suite.compute(
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+ references=split_featurised_dataset["test"]['Y'],
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+ predictions=preds["cat_boost_classifier::Y"])
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  ### Data splits