haneulpark
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Update README.md
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README.md
CHANGED
@@ -49,7 +49,7 @@ dataset_info:
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dtype: string
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- name: CAS RN
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dtype: string
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-
- name:
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dtype:
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class_label:
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names:
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@@ -90,7 +90,7 @@ dataset_info:
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dtype: string
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- name: CAS RN
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dtype: string
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-
- name:
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dtype:
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class_label:
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names:
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@@ -155,11 +155,11 @@ and inspecting the loaded dataset
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>>> Corr_Neg
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DatasetDict({
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test: Dataset({
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features: ['Name', 'Synonym', 'CAS RN', '
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num_rows: 181
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})
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train: Dataset({
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features: ['Name', 'Synonym', 'CAS RN', '
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num_rows: 1755
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})
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})
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@@ -192,7 +192,7 @@ then load, featurize, split, fit, and evaluate the catboost model
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"name": "cat_boost_classifier",
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"config": {
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"x_features": ['SMILES::morgan', 'SMILES::maccs_rdkit'],
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"y_features": ['
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model.train(split_featurised_dataset["train"])
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preds = model.predict(split_featurised_dataset["test"])
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@@ -200,8 +200,8 @@ then load, featurize, split, fit, and evaluate the catboost model
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classification_suite = load_suite("classification")
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scores = classification_suite.compute(
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references=split_featurised_dataset["test"]['
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predictions=preds["cat_boost_classifier::
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### Data splits
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dtype: string
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- name: CAS RN
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dtype: string
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- name: Y
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dtype:
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class_label:
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names:
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dtype: string
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- name: CAS RN
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dtype: string
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+
- name: Y
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dtype:
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class_label:
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names:
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>>> Corr_Neg
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DatasetDict({
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test: Dataset({
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features: ['Name', 'Synonym', 'CAS RN', 'Y', 'Detailed Page', 'Evidence', 'OECD TG 404', 'Data Source', 'Frequency', 'SMILES', 'SMILES URL', 'SMILES Source', 'Canonical SMILES', 'Split'],
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num_rows: 181
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})
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train: Dataset({
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features: ['Name', 'Synonym', 'CAS RN', 'Y', 'Detailed Page', 'Evidence', 'OECD TG 404', 'Data Source', 'Frequency', 'SMILES', 'SMILES URL', 'SMILES Source', 'Canonical SMILES', 'Split'],
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num_rows: 1755
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})
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})
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"name": "cat_boost_classifier",
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"config": {
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"x_features": ['SMILES::morgan', 'SMILES::maccs_rdkit'],
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"y_features": ['Y']}})
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model.train(split_featurised_dataset["train"])
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preds = model.predict(split_featurised_dataset["test"])
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classification_suite = load_suite("classification")
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scores = classification_suite.compute(
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references=split_featurised_dataset["test"]['Y'],
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predictions=preds["cat_boost_classifier::Y"])
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### Data splits
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