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README.md
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license:
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- agpl-3.0
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size_categories:
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source_datasets:
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- multimolecule/crw
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- multimolecule/tmrna_website
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- multimolecule/srpdb
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- multimolecule/spr
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- multimolecule/rnp
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- multimolecule/rfam
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- multimolecule/pdb
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task_categories:
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- text-generation
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- fill-mask
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## Dataset Description
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- **Homepage**: https://multimolecule.danling.org/datasets/rivas
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- **datasets**: https://huggingface.co/datasets/multimolecule/rivas
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- **Point of Contact**: [Elena Rivas](elenarivas@fas.harvard.edu)
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## Example Entry
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- **Square Brackets (`[` and `]`)**: Represent base pairs in pseudoknots (page 2).
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- **Curly Braces (`{` and `}`)**: Represent base pairs in additional pseudoknots (page 3).
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##
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This dataset is available in
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- [RIVAS-A](https://huggingface.co/datasets/multimolecule/rivas-a): Includes TrainSetA (3166 sequences) and TestSetA (697 sequences), emphasizing sequence diversity while minimizing overlap between training and test sets. Suitable for evaluating RNA secondary structure prediction models on diverse RNA families.
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- [RIVAS-B](https://huggingface.co/datasets/multimolecule/rivas-b): Consists of TrainSetB (1094 sequences) and TestSetB (430 sequences) derived from Rfam alignments, offering additional structural diversity and RNA types not present in RIVAS-A. Designed for testing the generalization capability of models trained on different types of RNA structures.
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license:
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- agpl-3.0
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size_categories:
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- 1K<n<10K
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task_categories:
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- text-generation
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- fill-mask
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## Dataset Description
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- **Homepage**: https://multimolecule.danling.org/datasets/rivas
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- **Point of Contact**: [Elena Rivas](elenarivas@fas.harvard.edu)
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## Example Entry
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- **Square Brackets (`[` and `]`)**: Represent base pairs in pseudoknots (page 2).
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- **Curly Braces (`{` and `}`)**: Represent base pairs in additional pseudoknots (page 3).
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## Variations
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This dataset is available in three variants:
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- [RIVAS](https://huggingface.co/datasets/multimolecule/rivas-a): Includes TrainSetA (3166 sequences) for training, TestSetA (697 sequences) for validation and TestSetB (430 sequences) for testing.
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- [RIVAS-A](https://huggingface.co/datasets/multimolecule/rivas-a): Includes TrainSetA (3166 sequences) and TestSetA (697 sequences), emphasizing sequence diversity while minimizing overlap between training and test sets. Suitable for evaluating RNA secondary structure prediction models on diverse RNA families.
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- [RIVAS-B](https://huggingface.co/datasets/multimolecule/rivas-b): Consists of TrainSetB (1094 sequences) and TestSetB (430 sequences) derived from Rfam alignments, offering additional structural diversity and RNA types not present in RIVAS-A. Designed for testing the generalization capability of models trained on different types of RNA structures.
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