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Push model using huggingface_hub.

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  1. README.md +11 -3
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@@ -3,16 +3,24 @@ base_model: ibm/biomed.sm.mv-te-84m
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  library_name: SmallMoleculeMultiView
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  license: apache-2.0
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  tags:
 
 
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  - chemistry
 
 
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  - model_hub_mixin
 
 
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  - molecules
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- - multiview
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- - pytorch
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  - pytorch_model_hub_mixin
 
 
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  ---
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  # ibm/biomed.sm.mv-te-84m-MoleculeNet-ligand_scaffold-SIDER-101
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- `biomed.sm.mv-te-84m` is a biomedical foundation model for small molecules created using **MMELON** (**M**ulti-view **M**olecular **E**mbedding with **L**ate Fusi**on**), a flexible approach to aggregate multiple views (sequence, image, graph) of molecules in a foundation model setting. While models based on single view representation typically performs well on some downstream tasks and not others, the multi-view model performs robustly across a wide range of property prediction tasks encompassing ligand-protein binding, molecular solubility, metabolism and toxicity. It has been applied to screen compounds against a large (> 100 targets) set of G Protein-Coupled receptors (GPCRs) to identify strong binders for 33 targets related to Alzheimer’s disease, which are validated through structure-based modeling and identification of key binding motifs [Multi-view biomedical foundation models for molecule-target and property prediction](https://arxiv.org/abs/2410.19704).
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  - **Developers:** IBM Research
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  - **GitHub Repository:** [https://github.com/BiomedSciAI/biomed-multi-view](https://github.com/BiomedSciAI/biomed-multi-view)
 
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  library_name: SmallMoleculeMultiView
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  license: apache-2.0
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  tags:
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+ - binding-affinity-prediction
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+ - bio-medical
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  - chemistry
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+ - drug-discovery
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+ - drug-target-interaction
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  - model_hub_mixin
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+ - molecular-property-prediction
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+ - moleculenet
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  - molecules
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+ - multi-view
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+ - multimodal
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  - pytorch_model_hub_mixin
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+ - small-molecules
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+ - virtual-screening
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  ---
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  # ibm/biomed.sm.mv-te-84m-MoleculeNet-ligand_scaffold-SIDER-101
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+ `biomed.sm.mv-te-84m` is a multimodal biomedical foundation model for small molecules created using **MMELON** (**M**ulti-view **M**olecular **E**mbedding with **L**ate Fusi**on**), a flexible approach to aggregate multiple views (sequence, image, graph) of molecules in a foundation model setting. While models based on single view representation typically performs well on some downstream tasks and not others, the multi-view model performs robustly across a wide range of property prediction tasks encompassing ligand-protein binding, molecular solubility, metabolism and toxicity. It has been applied to screen compounds against a large (> 100 targets) set of G Protein-Coupled receptors (GPCRs) to identify strong binders for 33 targets related to Alzheimer’s disease, which are validated through structure-based modeling and identification of key binding motifs [Multi-view biomedical foundation models for molecule-target and property prediction](https://arxiv.org/abs/2410.19704).
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  - **Developers:** IBM Research
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  - **GitHub Repository:** [https://github.com/BiomedSciAI/biomed-multi-view](https://github.com/BiomedSciAI/biomed-multi-view)