judithrosell commited on
Commit
afb7d8c
1 Parent(s): f15a6d1

End of training

Browse files
Files changed (1) hide show
  1. README.md +70 -0
README.md ADDED
@@ -0,0 +1,70 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ license: cc0-1.0
3
+ base_model: bionlp/bluebert_pubmed_mimic_uncased_L-12_H-768_A-12
4
+ tags:
5
+ - generated_from_trainer
6
+ metrics:
7
+ - precision
8
+ - recall
9
+ - f1
10
+ - accuracy
11
+ model-index:
12
+ - name: BlueBERT_BioNLP13CG_NER
13
+ results: []
14
+ ---
15
+
16
+ <!-- This model card has been generated automatically according to the information the Trainer had access to. You
17
+ should probably proofread and complete it, then remove this comment. -->
18
+
19
+ # BlueBERT_BioNLP13CG_NER
20
+
21
+ This model is a fine-tuned version of [bionlp/bluebert_pubmed_mimic_uncased_L-12_H-768_A-12](https://huggingface.co/bionlp/bluebert_pubmed_mimic_uncased_L-12_H-768_A-12) on the None dataset.
22
+ It achieves the following results on the evaluation set:
23
+ - Loss: 0.2929
24
+ - Precision: 0.9311
25
+ - Recall: 0.9373
26
+ - F1: 0.9342
27
+ - Accuracy: 0.9309
28
+
29
+ ## Model description
30
+
31
+ More information needed
32
+
33
+ ## Intended uses & limitations
34
+
35
+ More information needed
36
+
37
+ ## Training and evaluation data
38
+
39
+ More information needed
40
+
41
+ ## Training procedure
42
+
43
+ ### Training hyperparameters
44
+
45
+ The following hyperparameters were used during training:
46
+ - learning_rate: 2e-05
47
+ - train_batch_size: 16
48
+ - eval_batch_size: 16
49
+ - seed: 42
50
+ - gradient_accumulation_steps: 2
51
+ - total_train_batch_size: 32
52
+ - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
53
+ - lr_scheduler_type: linear
54
+ - num_epochs: 3
55
+
56
+ ### Training results
57
+
58
+ | Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
59
+ |:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
60
+ | No log | 0.99 | 95 | 0.4398 | 0.8891 | 0.8989 | 0.8940 | 0.8876 |
61
+ | No log | 2.0 | 191 | 0.3148 | 0.9259 | 0.9325 | 0.9292 | 0.9252 |
62
+ | No log | 2.98 | 285 | 0.2929 | 0.9311 | 0.9373 | 0.9342 | 0.9309 |
63
+
64
+
65
+ ### Framework versions
66
+
67
+ - Transformers 4.35.2
68
+ - Pytorch 2.1.0+cu121
69
+ - Datasets 2.16.0
70
+ - Tokenizers 0.15.0