Delete modeling_hf_nomic_bert.py
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modeling_hf_nomic_bert.py
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# Copyright (c) 2022, Tri Dao.
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# This BERT implementation is based on our MLPerf 2.0 and MLPerf 2.1 BERT implementation.
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# https://github.com/mlcommons/training_results_v2.0/blob/main/HazyResearch/benchmarks/bert/implementations/pytorch/modeling.py
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# https://github.com/mlcommons/training_results_v2.1/blob/main/Azure-HazyResearch/benchmarks/bert/implementations/ND96amsr_A100_v4/modeling.py
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import logging
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# Inspired by https://github.com/huggingface/transformers/blob/main/src/transformers/models/bert/modeling_bert.py
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import os
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import re
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from collections import OrderedDict
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from functools import partial
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from typing import List, Optional, Tuple, Union
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import torch
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import torch.nn as nn
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import torch.nn.functional as F
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from einops import rearrange, repeat
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from safetensors.torch import load_file as safe_load_file
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from transformers import GPT2Config, PreTrainedModel
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from transformers.models.bert.modeling_bert import (
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BaseModelOutputWithPoolingAndCrossAttentions,
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MaskedLMOutput,
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SequenceClassifierOutput,
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)
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from transformers.utils import SAFE_WEIGHTS_INDEX_NAME, SAFE_WEIGHTS_NAME, WEIGHTS_INDEX_NAME, WEIGHTS_NAME
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from transformers.utils.hub import cached_file, get_checkpoint_shard_files
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from .configuration_hf_nomic_bert import NomicBertConfig
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logger = logging.getLogger(__name__)
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# adapted from flash attention, added safe serialization option for hf models
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def state_dict_from_pretrained(model_name, safe_serialization=False, device=None, dtype=None):
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# If not fp32, then we don't want to load directly to the GPU
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mapped_device = "cpu" if dtype not in [torch.float32, None] else device
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is_sharded = False
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load_safe = False
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resolved_archive_file = None
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weights_path = os.path.join(model_name, WEIGHTS_NAME)
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weights_index_path = os.path.join(model_name, WEIGHTS_INDEX_NAME)
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safe_weights_path = os.path.join(model_name, SAFE_WEIGHTS_NAME)
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safe_weights_index_path = os.path.join(model_name, SAFE_WEIGHTS_INDEX_NAME)
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if os.path.isfile(weights_path):
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resolved_archive_file = cached_file(model_name, WEIGHTS_NAME, _raise_exceptions_for_missing_entries=False)
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elif os.path.isfile(weights_index_path):
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resolved_archive_file = cached_file(model_name, WEIGHTS_INDEX_NAME, _raise_exceptions_for_missing_entries=False)
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is_sharded = True
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elif os.path.isfile(safe_weights_path):
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resolved_archive_file = cached_file(model_name, SAFE_WEIGHTS_NAME, _raise_exceptions_for_missing_entries=False)
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load_safe = True
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elif os.path.isfile(safe_weights_index_path):
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resolved_archive_file = cached_file(
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model_name, SAFE_WEIGHTS_INDEX_NAME, _raise_exceptions_for_missing_entries=False
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)
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is_sharded = True
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load_safe = True
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else: # Try loading from HF hub instead of from local files
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weight_name = WEIGHTS_NAME if not safe_serialization else SAFE_WEIGHTS_NAME
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resolved_archive_file = cached_file(model_name, weight_name, _raise_exceptions_for_missing_entries=False)
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if resolved_archive_file is None:
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weight_index = WEIGHTS_INDEX_NAME if not safe_serialization else SAFE_WEIGHTS_INDEX_NAME
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resolved_archive_file = cached_file(model_name, weight_index, _raise_exceptions_for_missing_entries=False)
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if resolved_archive_file is not None:
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is_sharded = True
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load_safe = safe_serialization
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if resolved_archive_file is None:
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raise EnvironmentError(f"Model name {model_name} was not found.")
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if load_safe:
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loader = partial(safe_load_file, device=mapped_device)
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else:
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loader = partial(torch.load, map_location=mapped_device)
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if is_sharded:
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# resolved_archive_file becomes a list of files that point to the different
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# checkpoint shards in this case.
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resolved_archive_file, sharded_metadata = get_checkpoint_shard_files(model_name, resolved_archive_file)
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state_dict = {}
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for sharded_file in resolved_archive_file:
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state_dict.update(loader(sharded_file))
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else:
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state_dict = loader(resolved_archive_file)
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# Convert dtype before moving to GPU to save memory
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if dtype is not None:
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state_dict = {k: v.to(dtype=dtype) for k, v in state_dict.items()}
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state_dict = {k: v.to(device=device) for k, v in state_dict.items()}
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return state_dict
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def filter_shapes(state_dict, model):
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"""
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Filters the state dict to match the current model shape.
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"""
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filtered_state_dict = {}
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for key, value in state_dict.items():
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if key in model.state_dict():
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if value.shape == model.state_dict()[key].shape:
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filtered_state_dict[key] = value
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return filtered_state_dict
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def remap_bert_state_dict(state_dict, config, remove_bert=False, remove_cls_weights=False, add_pooling_layer=False):
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"""
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Map the state_dict of a Huggingface BERT model to be flash_attn compatible.
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"""
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def add_bert_prefix(key):
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# prepend bert. to the key
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if key.startswith("bert.") or key.startswith("cls."):
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return key
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return f"bert.{key}"
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state_dict = OrderedDict((add_bert_prefix(k), v) for k, v in state_dict.items())
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# LayerNorm
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def key_mapping_ln_gamma_beta(key):
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key = re.sub(r"LayerNorm.gamma$", "LayerNorm.weight", key)
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key = re.sub(r"LayerNorm.beta$", "LayerNorm.bias", key)
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return key
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state_dict = OrderedDict((key_mapping_ln_gamma_beta(k), v) for k, v in state_dict.items())
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# Layers
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def key_mapping_layers(key):
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return re.sub(r"^bert.encoder.layer\.", "bert.encoder.layers.", key)
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state_dict = OrderedDict((key_mapping_layers(k), v) for k, v in state_dict.items())
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# LayerNorm
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def key_mapping_ln(key):
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key = re.sub(r"^bert.embeddings.LayerNorm.", "bert.emb_ln.", key)
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key = re.sub(
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r"^bert.encoder.layers.(\d+).attention.output.LayerNorm.(weight|bias)",
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r"bert.encoder.layers.\1.norm1.\2",
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key,
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)
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key = re.sub(
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r"^bert.encoder.layers.(\d+).output.LayerNorm.(weight|bias)",
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r"bert.encoder.layers.\1.norm2.\2",
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key,
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)
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key = re.sub(
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r"^cls.predictions.transform.LayerNorm.(weight|bias)",
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r"cls.predictions.transform.layer_norm.\1",
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key,
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)
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return key
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state_dict = OrderedDict((key_mapping_ln(k), v) for k, v in state_dict.items())
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# MLP
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def key_mapping_mlp(key):
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key = re.sub(
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r"^bert.encoder.layers.(\d+).intermediate.dense.(weight|bias)",
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r"bert.encoder.layers.\1.mlp.fc1.\2",
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key,
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)
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key = re.sub(
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r"^bert.encoder.layers.(\d+).output.dense.(weight|bias)",
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r"bert.encoder.layers.\1.mlp.fc2.\2",
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key,
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)
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return key
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state_dict = OrderedDict((key_mapping_mlp(k), v) for k, v in state_dict.items())
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# Attention
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last_layer_subset = getattr(config, "last_layer_subset", False)
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for d in range(config.num_hidden_layers):
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if f"bert.encoder.layers.{d}.attention.self.query.weight" not in state_dict:
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continue
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Wq = state_dict.pop(f"bert.encoder.layers.{d}.attention.self.query.weight")
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Wk = state_dict.pop(f"bert.encoder.layers.{d}.attention.self.key.weight")
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Wv = state_dict.pop(f"bert.encoder.layers.{d}.attention.self.value.weight")
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bq = state_dict.pop(f"bert.encoder.layers.{d}.attention.self.query.bias")
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bk = state_dict.pop(f"bert.encoder.layers.{d}.attention.self.key.bias")
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bv = state_dict.pop(f"bert.encoder.layers.{d}.attention.self.value.bias")
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if not (last_layer_subset and d == config.num_hidden_layers - 1):
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state_dict[f"bert.encoder.layers.{d}.attn.Wqkv.weight"] = torch.cat([Wq, Wk, Wv], dim=0)
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state_dict[f"bert.encoder.layers.{d}.attn.Wqkv.bias"] = torch.cat([bq, bk, bv], dim=0)
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else:
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state_dict[f"bert.encoder.layers.{d}.attn.Wq.weight"] = Wq
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state_dict[f"bert.encoder.layers.{d}.attn.Wkv.weight"] = torch.cat([Wk, Wv], dim=0)
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state_dict[f"bert.encoder.layers.{d}.attn.Wq.bias"] = bq
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state_dict[f"bert.encoder.layers.{d}.attn.Wkv.bias"] = torch.cat([bk, bv], dim=0)
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def key_mapping_attn(key):
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return re.sub(
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r"^bert.encoder.layers.(\d+).attention.output.dense.(weight|bias)",
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r"bert.encoder.layers.\1.attn.out_proj.\2",
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key,
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)
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state_dict = OrderedDict((key_mapping_attn(k), v) for k, v in state_dict.items())
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def key_mapping_decoder_bias(key):
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return re.sub(r"^cls.predictions.bias", "cls.predictions.decoder.bias", key)
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# remove nsp weights, we don't use
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state_dict.pop("cls.seq_relationship.weight", None)
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state_dict.pop("cls.seq_relationship.bias", None)
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state_dict.pop("bert.embeddings.position_ids", None)
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state_dict = OrderedDict((key_mapping_decoder_bias(k), v) for k, v in state_dict.items())
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if remove_cls_weights:
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cls_weights = [
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"cls.predictions.decoder.bias",
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"cls.predictions.transform.dense.weight",
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"cls.predictions.transform.dense.bias",
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"cls.predictions.transform.layer_norm.weight",
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"cls.predictions.transform.layer_norm.bias",
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"cls.predictions.decoder.weight",
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]
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for weight in cls_weights:
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state_dict.pop(weight, None)
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# Word embedding
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pad_vocab_size_multiple = getattr(config, "pad_vocab_size_multiple", 1)
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if pad_vocab_size_multiple > 1:
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word_embeddings = state_dict["bert.embeddings.word_embeddings.weight"]
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state_dict["bert.embeddings.word_embeddings.weight"] = F.pad(
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word_embeddings, (0, 0, 0, config.vocab_size - word_embeddings.shape[0])
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)
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if not remove_cls_weights:
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decoder_weight = state_dict["cls.predictions.decoder.weight"]
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state_dict["cls.predictions.decoder.weight"] = F.pad(
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decoder_weight, (0, 0, 0, config.vocab_size - decoder_weight.shape[0])
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)
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# If the vocab was padded, we want to set the decoder bias for those padded indices to be
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# strongly negative (i.e. the decoder shouldn't predict those indices).
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# TD [2022-05-09]: I don't think it affects the MLPerf training.
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if "cls.predictions.decoder.bias" in state_dict:
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decoder_bias = state_dict["cls.predictions.decoder.bias"]
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state_dict["cls.predictions.decoder.bias"] = F.pad(
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decoder_bias, (0, config.vocab_size - decoder_bias.shape[0]), value=-100.0
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)
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if add_pooling_layer is False:
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pooler_weights = [
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"bert.pooler.dense.weight",
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"bert.pooler.dense.bias",
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]
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for key in pooler_weights:
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state_dict.pop(key, None)
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if remove_bert:
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def remove_bert_prefix(key):
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key = re.sub(r"^bert.", "", key)
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return key
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state_dict = OrderedDict((remove_bert_prefix(k), v) for k, v in state_dict.items())
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return state_dict
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class NomicBertPreTrainedModel(PreTrainedModel):
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"""An abstract class to handle weights initialization and
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a simple interface for dowloading and loading pretrained models.
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"""
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config_class = NomicBertConfig
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base_model_prefix = "model"
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supports_gradient_checkpointing = True
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_no_split_modules = ["Block"]
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_skip_keys_device_placement = "past_key_values"
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def __init__(self, config, *inputs, **kwargs):
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super().__init__(config)
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if not isinstance(config, GPT2Config):
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raise ValueError(
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"Parameter config in `{}(config)` should be an instance of class `GPT2Config`. "
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"To create a model from a Google pretrained model use "
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"`model = {}.from_pretrained(PRETRAINED_MODEL_NAME)`".format(
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self.__class__.__name__, self.__class__.__name__
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)
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)
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self.config = config
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@classmethod
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def from_pretrained(cls, model_name, config=None, *inputs, **kwargs):
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"""
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Instantiate a NomicBertPreTrainedModel from a pre-trained model file or a pytorch state dict.
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Download and cache the pre-trained model file if needed.
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Params:
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pretrained_model_name_or_path: either:
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- a path or url to a pretrained model archive containing:
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. `bert_config.json` a configuration file for the model
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. `pytorch_model.bin` a PyTorch dump of a NomicBertForPretraining instance
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- a path or url to a pretrained model archive containing:
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. `bert_config.json` a configuration file for the model
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. `model.chkpt` a TensorFlow checkpoint
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*inputs, **kwargs: additional input for the specific NomicBert class
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(ex: num_labels for NomicBertForSequenceClassification)
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"""
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# Instantiate model.
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if config is None:
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config = cls.config_class.from_pretrained(model_name)
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remove_cls = cls != NomicBertForPreTraining
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remove_bert_prefix = cls != NomicBertForPreTraining
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ignore_mismatched_shapes = kwargs.pop("ignore_mismatched_sizes", False)
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num_labels = kwargs.pop("num_labels", None)
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rotary_scaling_factor = kwargs.pop("rotary_scaling_factor", None)
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if rotary_scaling_factor:
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config.rotary_scaling_factor = rotary_scaling_factor
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if config.n_positions <= 0 and config.rotary_emb_fraction > 0:
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config.n_positions = 2048
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if num_labels:
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config.num_labels = num_labels
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if "add_pooling_layer" in kwargs:
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model = cls(config, *inputs, add_pooling_layer=kwargs.pop("add_pooling_layer"))
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else:
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if cls == NomicBertModel:
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model = cls(config, *inputs, add_pooling_layer=False)
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else:
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model = cls(config, *inputs)
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# TODO: fix this
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# Assuming we know what we're doing when loading from disk
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# Prob a bad assumption but i'm tired and want to train this asap
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if os.path.exists(model_name):
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model_path = f"{model_name}/pytorch_model.bin"
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if os.path.exists(model_path):
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state_dict = torch.load(f"{model_name}/pytorch_model.bin")
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else:
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model_path = f"{model_name}/model.safetensors"
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if not os.path.exists(model_path):
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raise ValueError(f"Model path {model_path} not found")
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state_dict = safe_load_file(model_path)
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if ignore_mismatched_shapes:
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state_dict = filter_shapes(state_dict, model)
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load_return = model.load_state_dict(state_dict, strict=False)
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else:
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# TODO: can probably check config class and see if we need to remap from a bert model
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345 |
-
state_dict = state_dict_from_pretrained(model_name, safe_serialization=kwargs.get("safe_serialization", False))
|
346 |
-
state_dict = remap_bert_state_dict(
|
347 |
-
state_dict,
|
348 |
-
config,
|
349 |
-
remove_bert=remove_bert_prefix,
|
350 |
-
remove_cls_weights=remove_cls,
|
351 |
-
add_pooling_layer=getattr(config, "add_pooling_layer", False),
|
352 |
-
)
|
353 |
-
if ignore_mismatched_shapes:
|
354 |
-
state_dict = filter_shapes(state_dict, model)
|
355 |
-
|
356 |
-
load_return = model.load_state_dict(state_dict, strict=True)
|
357 |
-
logger.warning(load_return)
|
358 |
-
return model
|
359 |
-
|
360 |
-
def _set_gradient_checkpointing(self, module, value=False):
|
361 |
-
if isinstance(module, NomicBertEncoder):
|
362 |
-
module.gradient_checkpointing = value
|
363 |
-
|
364 |
-
|
365 |
-
# https://github.com/huggingface/transformers/blob/7032e0203262ebb2ebf55da8d2e01f873973e835/src/transformers/models/bert/modeling_bert.py#L748
|
366 |
-
def _init_weights(module, initializer_range=0.02):
|
367 |
-
if isinstance(module, nn.Linear):
|
368 |
-
nn.init.normal_(module.weight, std=initializer_range)
|
369 |
-
if module.bias is not None:
|
370 |
-
nn.init.zeros_(module.bias)
|
371 |
-
elif isinstance(module, nn.Embedding):
|
372 |
-
nn.init.normal_(module.weight, std=initializer_range)
|
373 |
-
if module.padding_idx is not None:
|
374 |
-
nn.init.zeros_(module.weight[module.padding_idx])
|
375 |
-
|
376 |
-
|
377 |
-
class NomicBertEmbeddings(nn.Module):
|
378 |
-
def __init__(self, config):
|
379 |
-
"""
|
380 |
-
If max_position_embeddings <= 0, there's no position embeddings
|
381 |
-
If type_vocab_size <= 0, there's no token type embeddings
|
382 |
-
"""
|
383 |
-
super().__init__()
|
384 |
-
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
|
385 |
-
self.max_position_embeddings = config.max_position_embeddings if config.rotary_emb_fraction <= 0 else 0
|
386 |
-
self.type_vocab_size = config.type_vocab_size
|
387 |
-
if self.max_position_embeddings > 0 and config.rotary_emb_fraction <= 0:
|
388 |
-
self.position_embeddings = nn.Embedding(
|
389 |
-
config.max_position_embeddings,
|
390 |
-
config.hidden_size,
|
391 |
-
)
|
392 |
-
if self.type_vocab_size > 0:
|
393 |
-
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
|
394 |
-
|
395 |
-
def forward(self, input_ids, position_ids=None, token_type_ids=None):
|
396 |
-
"""
|
397 |
-
input_ids: (batch, seqlen)
|
398 |
-
position_ids: (batch, seqlen)
|
399 |
-
token_type_ids: (batch, seqlen)
|
400 |
-
"""
|
401 |
-
batch_size, seqlen = input_ids.shape
|
402 |
-
embeddings = self.word_embeddings(input_ids)
|
403 |
-
|
404 |
-
if self.type_vocab_size > 0:
|
405 |
-
if token_type_ids is None:
|
406 |
-
token_type_ids = torch.zeros(seqlen, dtype=torch.long, device=input_ids.device)
|
407 |
-
token_type_embeddings = self.token_type_embeddings(token_type_ids)
|
408 |
-
embeddings = embeddings + token_type_embeddings
|
409 |
-
|
410 |
-
if self.max_position_embeddings > 0:
|
411 |
-
if position_ids is None:
|
412 |
-
position_ids = torch.arange(seqlen, dtype=torch.long, device=input_ids.device)
|
413 |
-
position_embeddings = self.position_embeddings(position_ids)
|
414 |
-
embeddings = embeddings + position_embeddings
|
415 |
-
return embeddings
|
416 |
-
|
417 |
-
|
418 |
-
class NomicBertMLP(nn.Module):
|
419 |
-
def __init__(
|
420 |
-
self,
|
421 |
-
in_features,
|
422 |
-
hidden_features=None,
|
423 |
-
out_features=None,
|
424 |
-
activation=F.gelu,
|
425 |
-
bias1=True,
|
426 |
-
bias2=True,
|
427 |
-
return_residual=False,
|
428 |
-
fused_bias_fc=False,
|
429 |
-
):
|
430 |
-
super().__init__()
|
431 |
-
out_features = out_features if out_features is not None else in_features
|
432 |
-
hidden_features = hidden_features if hidden_features is not None else in_features * 4
|
433 |
-
self.return_residual = return_residual
|
434 |
-
self.fc1 = nn.Linear(in_features, hidden_features, bias=bias1)
|
435 |
-
approximate = "tanh" if activation in ["gelu_new", "gelu_fast", "gelu_pytorch_tanh"] else "none"
|
436 |
-
self.activation = nn.GELU(approximate=approximate) if activation == "gelu" else activation
|
437 |
-
self.fc2 = nn.Linear(hidden_features, out_features, bias=bias2)
|
438 |
-
|
439 |
-
def forward(self, x):
|
440 |
-
y = self.fc1(x)
|
441 |
-
y = self.activation(y)
|
442 |
-
y = self.fc2(y)
|
443 |
-
return y if not self.return_residual else (y, x)
|
444 |
-
|
445 |
-
|
446 |
-
class NomciBertGatedMLP(nn.Module):
|
447 |
-
def __init__(
|
448 |
-
self,
|
449 |
-
in_features,
|
450 |
-
hidden_features=None,
|
451 |
-
out_features=None,
|
452 |
-
activation=F.sigmoid,
|
453 |
-
bias1=True,
|
454 |
-
bias2=True,
|
455 |
-
multiple_of=256,
|
456 |
-
return_residual=False,
|
457 |
-
fused_bias_fc=True,
|
458 |
-
device=None,
|
459 |
-
dtype=None,
|
460 |
-
):
|
461 |
-
super().__init__()
|
462 |
-
out_features = out_features if out_features is not None else in_features
|
463 |
-
hidden_features = hidden_features if hidden_features is not None else int(8 * in_features / 3)
|
464 |
-
hidden_features = (hidden_features + multiple_of - 1) // multiple_of * multiple_of
|
465 |
-
self.return_residual = return_residual
|
466 |
-
|
467 |
-
self.fc11 = nn.Linear(in_features, hidden_features, bias=bias1)
|
468 |
-
self.fc12 = nn.Linear(in_features, hidden_features, bias=bias1)
|
469 |
-
self.activation = activation
|
470 |
-
self.fc2 = nn.Linear(hidden_features, out_features, bias=bias2)
|
471 |
-
|
472 |
-
def forward(self, x):
|
473 |
-
y = self.fc11(x)
|
474 |
-
gate = self.fc12(x)
|
475 |
-
if self.activation == F.sigmoid: # Special case for GLU
|
476 |
-
y = F.glu(torch.cat([y, gate], dim=-1), dim=-1)
|
477 |
-
else:
|
478 |
-
y = y * self.activation(gate)
|
479 |
-
y = self.fc2(y)
|
480 |
-
return y if not self.return_residual else (y, x)
|
481 |
-
|
482 |
-
|
483 |
-
def rotate_half(x, interleaved=False):
|
484 |
-
if not interleaved:
|
485 |
-
x1, x2 = x.chunk(2, dim=-1)
|
486 |
-
return torch.cat((-x2, x1), dim=-1)
|
487 |
-
else:
|
488 |
-
x1, x2 = x[..., ::2], x[..., 1::2]
|
489 |
-
return rearrange(torch.stack((-x2, x1), dim=-1), "... d two -> ... (d two)", two=2)
|
490 |
-
|
491 |
-
|
492 |
-
def apply_rotary_emb(x, cos, sin, offset=0, interleaved=False):
|
493 |
-
"""
|
494 |
-
x: (batch_size, seqlen, nheads, headdim)
|
495 |
-
cos, sin: (seqlen, rotary_dim / 2) or (batch_size, seqlen, rotary_dim / 2)
|
496 |
-
"""
|
497 |
-
ro_dim = cos.shape[-1] * 2
|
498 |
-
assert ro_dim <= x.shape[-1]
|
499 |
-
cos, sin = (
|
500 |
-
cos[offset : offset + x.shape[1]],
|
501 |
-
sin[offset : offset + x.shape[1]],
|
502 |
-
)
|
503 |
-
cos = repeat(cos, "... d -> ... 1 (2 d)" if not interleaved else "... d -> ... 1 (d 2)")
|
504 |
-
sin = repeat(sin, "... d -> ... 1 (2 d)" if not interleaved else "... d -> ... 1 (d 2)")
|
505 |
-
return torch.cat(
|
506 |
-
[x[..., :ro_dim] * cos + rotate_half(x[..., :ro_dim], interleaved) * sin, x[..., ro_dim:]],
|
507 |
-
dim=-1,
|
508 |
-
)
|
509 |
-
|
510 |
-
|
511 |
-
class NomicBertRotaryEmbedding(nn.Module):
|
512 |
-
def __init__(
|
513 |
-
self,
|
514 |
-
dim: int,
|
515 |
-
base=10000.0,
|
516 |
-
interleaved=False,
|
517 |
-
scale_base=None,
|
518 |
-
pos_idx_in_fp32=True,
|
519 |
-
device=None,
|
520 |
-
):
|
521 |
-
"""
|
522 |
-
interleaved: if True, rotate pairs of even and odd dimensions (GPT-J style) instead
|
523 |
-
of 1st half and 2nd half (GPT-NeoX style).
|
524 |
-
pos_idx_in_fp32: if True, the position indices [0.0, ..., seqlen - 1] are in fp32,
|
525 |
-
otherwise they might be in lower precision.
|
526 |
-
This option was added because previously (before 2023-07-02), when we construct
|
527 |
-
the position indices, we use the dtype of self.inv_freq. In most cases this would
|
528 |
-
be fp32, but if the model is trained in pure bf16 (not mixed precision), then
|
529 |
-
self.inv_freq would be bf16, and the position indices are also in bf16.
|
530 |
-
Because of the limited precision of bf16 (e.g. 1995.0 is rounded to 2000.0), the
|
531 |
-
embeddings for some positions will coincide.
|
532 |
-
To maintain compatibility with models previously trained in pure bf16,
|
533 |
-
we add this option.
|
534 |
-
"""
|
535 |
-
super().__init__()
|
536 |
-
self.dim = dim
|
537 |
-
self.base = float(base)
|
538 |
-
self.pos_idx_in_fp32 = pos_idx_in_fp32
|
539 |
-
# Generate and save the inverse frequency buffer (non trainable)
|
540 |
-
inv_freq = self._compute_inv_freq(device)
|
541 |
-
self.register_buffer("inv_freq", inv_freq, persistent=False)
|
542 |
-
self.interleaved = interleaved
|
543 |
-
self.scale_base = scale_base
|
544 |
-
scale = (
|
545 |
-
(torch.arange(0, dim, 2, device=device, dtype=torch.float32) + 0.4 * dim) / (1.4 * dim)
|
546 |
-
if scale_base is not None
|
547 |
-
else None
|
548 |
-
)
|
549 |
-
self.register_buffer("scale", scale, persistent=False)
|
550 |
-
|
551 |
-
self._seq_len_cached = 0
|
552 |
-
self._cos_cached = None
|
553 |
-
self._sin_cached = None
|
554 |
-
self._cos_k_cached = None
|
555 |
-
self._sin_k_cached = None
|
556 |
-
|
557 |
-
def _compute_inv_freq(self, device=None):
|
558 |
-
return 1.0 / (self.base ** (torch.arange(0, self.dim, 2, device=device, dtype=torch.float32) / self.dim))
|
559 |
-
|
560 |
-
def _update_cos_sin_cache(self, seqlen, device=None, dtype=None):
|
561 |
-
# Reset the tables if the sequence length has changed,
|
562 |
-
# if we're on a new device (possibly due to tracing for instance),
|
563 |
-
# or if we're switching from inference mode to training
|
564 |
-
if (
|
565 |
-
seqlen > self._seq_len_cached
|
566 |
-
or self._cos_cached is None
|
567 |
-
or self._cos_cached.device != device
|
568 |
-
or self._cos_cached.dtype != dtype
|
569 |
-
or (self.training and self._cos_cached.is_inference())
|
570 |
-
):
|
571 |
-
self._seq_len_cached = seqlen
|
572 |
-
# We want fp32 here, not self.inv_freq.dtype, since the model could be loaded in bf16
|
573 |
-
# And the output of arange can be quite large, so bf16 would lose a lot of precision.
|
574 |
-
# However, for compatibility reason, we add an option to use the dtype of self.inv_freq.
|
575 |
-
if self.pos_idx_in_fp32:
|
576 |
-
t = torch.arange(seqlen, device=device, dtype=torch.float32)
|
577 |
-
# We want fp32 here as well since inv_freq will be multiplied with t, and the output
|
578 |
-
# will be large. Having it in bf16 will lose a lot of precision and cause the
|
579 |
-
# cos & sin output to change significantly.
|
580 |
-
# We want to recompute self.inv_freq if it was not loaded in fp32
|
581 |
-
if self.inv_freq.dtype != torch.float32:
|
582 |
-
inv_freq = self._compute_inv_freq(device=device)
|
583 |
-
else:
|
584 |
-
inv_freq = self.inv_freq
|
585 |
-
else:
|
586 |
-
t = torch.arange(seqlen, device=device, dtype=self.inv_freq.dtype)
|
587 |
-
inv_freq = self.inv_freq
|
588 |
-
# Don't do einsum, it converts fp32 to fp16 under AMP
|
589 |
-
# freqs = torch.einsum("i,j->ij", t, self.inv_freq)
|
590 |
-
freqs = torch.outer(t, inv_freq)
|
591 |
-
self._cos_cached = torch.cos(freqs).to(dtype)
|
592 |
-
self._sin_cached = torch.sin(freqs).to(dtype)
|
593 |
-
|
594 |
-
def forward(
|
595 |
-
self,
|
596 |
-
qkv: torch.Tensor,
|
597 |
-
kv: Optional[torch.Tensor] = None,
|
598 |
-
seqlen_offset: Union[int, torch.Tensor] = 0,
|
599 |
-
max_seqlen: Optional[int] = None,
|
600 |
-
) -> Tuple[torch.Tensor, torch.Tensor]:
|
601 |
-
"""
|
602 |
-
qkv: (batch, seqlen, 3, nheads, headdim) if kv is none,
|
603 |
-
else it's just q of shape (batch, seqlen, nheads, headdim)
|
604 |
-
kv: (batch, seqlen, 2, nheads, headdim)
|
605 |
-
seqlen_offset: (batch_size,) or int. Each sequence in x is shifted by this amount.
|
606 |
-
Most commonly used in inference when we have KV cache.
|
607 |
-
If it's a tensor of shape (batch_size,), then to update the cos / sin cache, one
|
608 |
-
should pass in max_seqlen, which will update the cos / sin cache up to that length.
|
609 |
-
Apply rotary embedding *inplace* to qkv and / or kv.
|
610 |
-
"""
|
611 |
-
seqlen = qkv.shape[1]
|
612 |
-
if seqlen > self._seq_len_cached:
|
613 |
-
self._update_cos_sin_cache(seqlen, device=qkv.device, dtype=qkv.dtype)
|
614 |
-
elif max_seqlen is not None:
|
615 |
-
self._update_cos_sin_cache(max_seqlen, device=qkv.device, dtype=qkv.dtype)
|
616 |
-
elif isinstance(seqlen_offset, int):
|
617 |
-
self._update_cos_sin_cache(seqlen + seqlen_offset, device=qkv.device, dtype=qkv.dtype)
|
618 |
-
|
619 |
-
q_rot = apply_rotary_emb(qkv[:, :, 0], self._cos_cached, self._sin_cached, seqlen_offset, self.interleaved)
|
620 |
-
k_rot = apply_rotary_emb(qkv[:, :, 1], self._cos_cached, self._sin_cached, seqlen_offset, self.interleaved)
|
621 |
-
return torch.stack((q_rot, k_rot, qkv[:, :, 2]), dim=2)
|
622 |
-
|
623 |
-
|
624 |
-
class NomicBertDynamicNTKRotaryEmbedding(NomicBertRotaryEmbedding):
|
625 |
-
def __init__(self, rotary_scaling_factor, max_position_embeddings, **kwargs):
|
626 |
-
super().__init__(**kwargs)
|
627 |
-
self.rotary_scaling_factor = rotary_scaling_factor
|
628 |
-
self.max_position_embeddings = max_position_embeddings
|
629 |
-
|
630 |
-
def _compute_inv_freq(self, base=None, device=None):
|
631 |
-
if base is None:
|
632 |
-
base = self.base
|
633 |
-
return 1.0 / (base ** (torch.arange(0, self.dim, 2, device=device, dtype=torch.float32) / self.dim))
|
634 |
-
|
635 |
-
def _update_cos_sin_cache(self, seqlen, device=None, dtype=None):
|
636 |
-
# Reset the tables if the sequence length has changed,
|
637 |
-
# if we're on a new device (possibly due to tracing for instance),
|
638 |
-
# or if we're switching from inference mode to training
|
639 |
-
if seqlen > self.max_position_embeddings:
|
640 |
-
base = self.base * (
|
641 |
-
(self.rotary_scaling_factor * seqlen / self.max_position_embeddings) - (self.rotary_scaling_factor - 1)
|
642 |
-
) ** (self.dim / (self.dim - 2))
|
643 |
-
inv_freq = self._compute_inv_freq(base=base, device=device)
|
644 |
-
self.register_buffer("inv_freq", inv_freq, persistent=False)
|
645 |
-
|
646 |
-
if (
|
647 |
-
seqlen > self._seq_len_cached
|
648 |
-
or self._cos_cached is None
|
649 |
-
or self._cos_cached.device != device
|
650 |
-
or self._cos_cached.dtype != dtype
|
651 |
-
or (self.training and self._cos_cached.is_inference())
|
652 |
-
):
|
653 |
-
self._seq_len_cached = seqlen
|
654 |
-
# We want fp32 here, not self.inv_freq.dtype, since the model could be loaded in bf16
|
655 |
-
# And the output of arange can be quite large, so bf16 would lose a lot of precision.
|
656 |
-
# However, for compatibility reason, we add an option to use the dtype of self.inv_freq.
|
657 |
-
if self.pos_idx_in_fp32:
|
658 |
-
t = torch.arange(seqlen, device=device, dtype=torch.float32)
|
659 |
-
# We want fp32 here as well since inv_freq will be multiplied with t, and the output
|
660 |
-
# will be large. Having it in bf16 will lose a lot of precision and cause the
|
661 |
-
# cos & sin output to change significantly.
|
662 |
-
# We want to recompute self.inv_freq if it was not loaded in fp32
|
663 |
-
if self.inv_freq.dtype != torch.float32:
|
664 |
-
if seqlen > self.max_position_embeddings:
|
665 |
-
base = self.base * (
|
666 |
-
(self.scaling_factor * seqlen / self.max_position_embeddings) - (self.scaling_factor - 1)
|
667 |
-
) ** (self.dim / (self.dim - 2))
|
668 |
-
else:
|
669 |
-
base = self.base
|
670 |
-
inv_freq = self._compute_inv_freq(device=device, base=base)
|
671 |
-
else:
|
672 |
-
inv_freq = self.inv_freq
|
673 |
-
else:
|
674 |
-
t = torch.arange(seqlen, device=device, dtype=self.inv_freq.dtype)
|
675 |
-
inv_freq = self.inv_freq
|
676 |
-
# Don't do einsum, it converts fp32 to fp16 under AMP
|
677 |
-
# freqs = torch.einsum("i,j->ij", t, self.inv_freq)
|
678 |
-
freqs = torch.outer(t, inv_freq)
|
679 |
-
if self.scale is None:
|
680 |
-
self._cos_cached = torch.cos(freqs).to(dtype)
|
681 |
-
self._sin_cached = torch.sin(freqs).to(dtype)
|
682 |
-
else:
|
683 |
-
power = (
|
684 |
-
torch.arange(seqlen, dtype=self.scale.dtype, device=self.scale.device) - seqlen // 2
|
685 |
-
) / self.scale_base
|
686 |
-
scale = self.scale.to(device=power.device) ** rearrange(power, "s -> s 1")
|
687 |
-
# We want the multiplication by scale to happen in fp32
|
688 |
-
self._cos_cached = (torch.cos(freqs) * scale).to(dtype)
|
689 |
-
self._sin_cached = (torch.sin(freqs) * scale).to(dtype)
|
690 |
-
self._cos_k_cached = (torch.cos(freqs) / scale).to(dtype)
|
691 |
-
self._sin_k_cached = (torch.sin(freqs) / scale).to(dtype)
|
692 |
-
|
693 |
-
|
694 |
-
class NomicBertAttention(nn.Module):
|
695 |
-
"""Multi-head self-attention and cross-attention"""
|
696 |
-
|
697 |
-
def __init__(
|
698 |
-
self,
|
699 |
-
config,
|
700 |
-
) -> None:
|
701 |
-
"""
|
702 |
-
num_heads_kv: can be used to toggle MQA / GQA. If None, use num_heads.
|
703 |
-
return_residual: whether to return the input x along with the output. This is for
|
704 |
-
performance reason: for post-norm architecture, returning the input allows us
|
705 |
-
to fuse the backward of nn.Linear with the residual connection.
|
706 |
-
"""
|
707 |
-
super().__init__()
|
708 |
-
self.embed_dim = config.n_embd
|
709 |
-
self.use_flash_attn = config.use_flash_attn
|
710 |
-
self.fused_bias_fc = config.fused_bias_fc
|
711 |
-
|
712 |
-
self.num_heads = config.n_head
|
713 |
-
self.num_heads_kv = config.num_heads_kv if getattr(config, "num_heads_kv", None) is not None else self.num_heads
|
714 |
-
assert self.embed_dim % self.num_heads == 0, "embed_dim must be divisible by num_heads"
|
715 |
-
self.head_dim = self.embed_dim // self.num_heads
|
716 |
-
# we don't really support mqa / gqa for now
|
717 |
-
qkv_dim = self.head_dim * (self.num_heads + 2 * self.num_heads_kv)
|
718 |
-
|
719 |
-
self.register_buffer(
|
720 |
-
"norm_factor",
|
721 |
-
torch.sqrt(torch.tensor(self.head_dim, dtype=torch.float32)).to(torch.get_default_dtype()),
|
722 |
-
persistent=False,
|
723 |
-
)
|
724 |
-
|
725 |
-
self.rotary_emb_dim = self.head_dim * config.rotary_emb_fraction
|
726 |
-
if self.rotary_emb_dim > 0:
|
727 |
-
if config.rotary_scaling_factor:
|
728 |
-
self.rotary_emb = NomicBertDynamicNTKRotaryEmbedding(
|
729 |
-
dim=self.rotary_emb_dim,
|
730 |
-
base=config.rotary_emb_base,
|
731 |
-
scale_base=config.rotary_emb_scale_base,
|
732 |
-
interleaved=config.rotary_emb_interleaved,
|
733 |
-
rotary_scaling_factor=config.rotary_scaling_factor,
|
734 |
-
max_position_embeddings=config.max_trained_positions,
|
735 |
-
)
|
736 |
-
else:
|
737 |
-
self.rotary_emb = NomicBertRotaryEmbedding(
|
738 |
-
dim=self.rotary_emb_dim,
|
739 |
-
base=config.rotary_emb_base,
|
740 |
-
scale_base=config.rotary_emb_scale_base,
|
741 |
-
interleaved=config.rotary_emb_interleaved,
|
742 |
-
)
|
743 |
-
# bug in xformers: https://github.com/facebookresearch/xformers/issues/841
|
744 |
-
# uses the head dimension instead of the sequence dimension
|
745 |
-
self.rotary_head_dim = getattr(config, "rotary_head_dim", False)
|
746 |
-
|
747 |
-
self.Wqkv = nn.Linear(self.embed_dim, qkv_dim, bias=config.qkv_proj_bias)
|
748 |
-
|
749 |
-
self.out_proj = nn.Linear(self.embed_dim, self.embed_dim, bias=config.qkv_proj_bias)
|
750 |
-
self.causal = config.causal
|
751 |
-
self.drop = nn.Dropout(config.attn_pdrop)
|
752 |
-
|
753 |
-
def forward(
|
754 |
-
self,
|
755 |
-
hidden_states: torch.Tensor,
|
756 |
-
attention_mask: Optional[torch.Tensor] = None,
|
757 |
-
position_ids: Optional[torch.LongTensor] = None,
|
758 |
-
past_key_value: Optional[Tuple[torch.Tensor]] = None,
|
759 |
-
output_attentions: bool = False,
|
760 |
-
use_cache: bool = False,
|
761 |
-
is_padded_inputs: Optional[bool] = True,
|
762 |
-
cu_seqlens: Optional[torch.Tensor] = None,
|
763 |
-
max_seq_len: Optional[int] = None,
|
764 |
-
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
|
765 |
-
|
766 |
-
has_layer_past = past_key_value is not None
|
767 |
-
|
768 |
-
if has_layer_past:
|
769 |
-
past_key_value = past_key_value[0]
|
770 |
-
past_len = past_key_value[1]
|
771 |
-
else:
|
772 |
-
past_len = 0
|
773 |
-
|
774 |
-
qkv = self.Wqkv(hidden_states)
|
775 |
-
qkv = rearrange(qkv, "... (three h d) -> ... three h d", three=3, d=self.head_dim)
|
776 |
-
|
777 |
-
past_key_value = (past_key_value, past_len + qkv.size(1)) if use_cache else None
|
778 |
-
|
779 |
-
if self.rotary_emb_dim > 0:
|
780 |
-
if self.rotary_head_dim:
|
781 |
-
qkv = rearrange(qkv, "b s three h d -> b h three s d")
|
782 |
-
qkv = self.rotary_emb(qkv, seqlen_offset=past_len)
|
783 |
-
|
784 |
-
if self.rotary_head_dim:
|
785 |
-
qkv = rearrange(qkv, "b h three s d -> b s three h d")
|
786 |
-
|
787 |
-
query, key, value = qkv[:, :, 0], qkv[:, :, 1], qkv[:, :, 2]
|
788 |
-
|
789 |
-
query = query.permute(0, 2, 1, 3)
|
790 |
-
key = key.permute(0, 2, 1, 3)
|
791 |
-
value = value.permute(0, 2, 1, 3)
|
792 |
-
|
793 |
-
attention_scores = torch.matmul(query, key.transpose(-1, -2)) / self.norm_factor
|
794 |
-
if attention_mask is not None:
|
795 |
-
attention_scores = attention_scores + attention_mask
|
796 |
-
|
797 |
-
attentions_probs = F.softmax(attention_scores, dim=-1)
|
798 |
-
attentions_probs = self.drop(attentions_probs)
|
799 |
-
|
800 |
-
attn_output = torch.matmul(attentions_probs, value)
|
801 |
-
attn_output = rearrange(attn_output.permute(0, 2, 1, 3), "... h d -> ... (h d)")
|
802 |
-
|
803 |
-
attn_output = self.out_proj(attn_output)
|
804 |
-
|
805 |
-
return attn_output
|
806 |
-
|
807 |
-
|
808 |
-
class NomicBertBlock(NomicBertPreTrainedModel):
|
809 |
-
def __init__(
|
810 |
-
self,
|
811 |
-
config,
|
812 |
-
):
|
813 |
-
super().__init__(config=config)
|
814 |
-
self.prenorm = config.prenorm
|
815 |
-
self.fused_dropout_add_ln = config.fused_dropout_add_ln
|
816 |
-
|
817 |
-
self.attn = NomicBertAttention(config)
|
818 |
-
activation = (
|
819 |
-
F.sigmoid
|
820 |
-
if config.activation_function == "glu"
|
821 |
-
else (F.silu if config.activation_function == "swiglu" else F.gelu)
|
822 |
-
)
|
823 |
-
if config.activation_function in ["glu", "swiglu", "geglu"]:
|
824 |
-
self.mlp = NomciBertGatedMLP(
|
825 |
-
config.n_embd,
|
826 |
-
hidden_features=config.n_inner,
|
827 |
-
bias1=config.mlp_fc1_bias,
|
828 |
-
bias2=config.mlp_fc2_bias,
|
829 |
-
activation=activation,
|
830 |
-
fused_bias_fc=config.fused_bias_fc,
|
831 |
-
)
|
832 |
-
else:
|
833 |
-
self.mlp = NomicBertMLP(
|
834 |
-
config.n_embd,
|
835 |
-
hidden_features=config.n_inner,
|
836 |
-
bias1=config.mlp_fc1_bias,
|
837 |
-
bias2=config.mlp_fc2_bias,
|
838 |
-
activation=activation,
|
839 |
-
fused_bias_fc=config.fused_bias_fc,
|
840 |
-
)
|
841 |
-
|
842 |
-
self.dropout1 = nn.Dropout(config.resid_pdrop)
|
843 |
-
self.norm1 = nn.LayerNorm(config.n_embd, eps=config.layer_norm_epsilon)
|
844 |
-
self.norm2 = nn.LayerNorm(config.n_embd, eps=config.layer_norm_epsilon)
|
845 |
-
self.dropout2 = nn.Dropout(config.resid_pdrop)
|
846 |
-
|
847 |
-
def forward(
|
848 |
-
self,
|
849 |
-
hidden_states: torch.Tensor,
|
850 |
-
hidden_states2: torch.Tensor,
|
851 |
-
residual: Optional[torch.Tensor] = None,
|
852 |
-
attention_mask: Optional[torch.Tensor] = None,
|
853 |
-
position_ids: Optional[torch.LongTensor] = None,
|
854 |
-
past_key_value: Optional[Tuple[torch.Tensor]] = None,
|
855 |
-
is_padded_inputs: Optional[bool] = True,
|
856 |
-
output_attentions: Optional[bool] = False,
|
857 |
-
use_cache: Optional[bool] = False,
|
858 |
-
cu_seqlens: Optional[torch.Tensor] = None,
|
859 |
-
max_seq_len: Optional[int] = None,
|
860 |
-
):
|
861 |
-
r"""Pass the input through the encoder layer.
|
862 |
-
|
863 |
-
Args:
|
864 |
-
hidden_states: the sequence to the encoder layer (required).
|
865 |
-
residual: if postnorm, residual=None, If prenorm, hidden_states = Attn/MLP(LN(residual))
|
866 |
-
mixer_subset: for cross-attention only. If not None, will take a subset of x
|
867 |
-
before applying the query projection. Useful for e.g., ViT where we only care
|
868 |
-
about the CLS token in the last layer.
|
869 |
-
"""
|
870 |
-
if self.prenorm:
|
871 |
-
dropped = self.dropout1(hidden_states)
|
872 |
-
residual = (dropped + residual) if residual is not None else dropped
|
873 |
-
hidden_states = self.norm1(residual.to(dtype=self.norm1.weight.dtype))
|
874 |
-
hidden_states = self.attn(
|
875 |
-
hidden_states,
|
876 |
-
attention_mask=attention_mask,
|
877 |
-
is_padded_inputs=is_padded_inputs,
|
878 |
-
cu_seqlens=cu_seqlens,
|
879 |
-
max_seq_len=max_seq_len,
|
880 |
-
)
|
881 |
-
|
882 |
-
dropped = self.dropout2(hidden_states)
|
883 |
-
residual = (dropped + residual) if residual is not None else dropped
|
884 |
-
hidden_states = self.norm2(residual.to(dtype=self.norm2.weight.dtype))
|
885 |
-
hidden_states = self.mlp(hidden_states)
|
886 |
-
|
887 |
-
return hidden_states, None, residual
|
888 |
-
else:
|
889 |
-
assert residual is None
|
890 |
-
attn_outputs = self.attn(
|
891 |
-
hidden_states,
|
892 |
-
attention_mask=attention_mask,
|
893 |
-
is_padded_inputs=is_padded_inputs,
|
894 |
-
cu_seqlens=cu_seqlens,
|
895 |
-
max_seq_len=max_seq_len,
|
896 |
-
)
|
897 |
-
hidden_states = self.norm1((self.dropout1(attn_outputs) + hidden_states).to(dtype=self.norm1.weight.dtype))
|
898 |
-
mlp_out = self.mlp(hidden_states)
|
899 |
-
|
900 |
-
hidden_states = self.norm2((self.dropout2(mlp_out) + hidden_states).to(dtype=self.norm2.weight.dtype))
|
901 |
-
return hidden_states, None, None
|
902 |
-
|
903 |
-
|
904 |
-
class NomicBertEncoder(nn.Module):
|
905 |
-
def __init__(self, config: GPT2Config):
|
906 |
-
super().__init__()
|
907 |
-
self.layers = nn.ModuleList([NomicBertBlock(config) for _ in range(config.n_layer)])
|
908 |
-
self.gradient_checkpointing = False
|
909 |
-
self.config = config
|
910 |
-
|
911 |
-
def forward(
|
912 |
-
self,
|
913 |
-
hidden_states: torch.LongTensor = None,
|
914 |
-
attention_mask: Optional[torch.Tensor] = None,
|
915 |
-
position_ids: Optional[torch.LongTensor] = None,
|
916 |
-
past_key_values: Optional[List[torch.FloatTensor]] = None,
|
917 |
-
inputs_embeds: Optional[torch.FloatTensor] = None,
|
918 |
-
use_cache: Optional[bool] = None,
|
919 |
-
output_attentions: Optional[bool] = None,
|
920 |
-
output_hidden_states: Optional[bool] = None,
|
921 |
-
return_dict: Optional[bool] = None,
|
922 |
-
is_padded_inputs: Optional[bool] = True,
|
923 |
-
):
|
924 |
-
"""If subset_mask is not None, we only want output for the subset of the sequence.
|
925 |
-
This means that we only compute the last layer output for these tokens.
|
926 |
-
subset_mask: (batch, seqlen), dtype=torch.bool
|
927 |
-
"""
|
928 |
-
hidden_states2 = None
|
929 |
-
residual = None
|
930 |
-
|
931 |
-
for _, layer in enumerate(self.layers):
|
932 |
-
if self.gradient_checkpointing and self.training:
|
933 |
-
|
934 |
-
def create_custom_forward(module):
|
935 |
-
def custom_forward(*inputs):
|
936 |
-
# None for past_key_value
|
937 |
-
return module(*inputs)
|
938 |
-
|
939 |
-
return custom_forward
|
940 |
-
|
941 |
-
hidden_states, hidden_states2, residual = torch.utils.checkpoint.checkpoint(
|
942 |
-
create_custom_forward(layer),
|
943 |
-
hidden_states,
|
944 |
-
hidden_states2,
|
945 |
-
residual,
|
946 |
-
attention_mask,
|
947 |
-
None,
|
948 |
-
None,
|
949 |
-
is_padded_inputs,
|
950 |
-
# if you freeze ANY layers, you need `use_reentrant=False`
|
951 |
-
# https://github.com/huggingface/transformers/issues/21381
|
952 |
-
# https://discuss.pytorch.org/t/checkpoint-with-no-grad-requiring-inputs-problem/19117/7
|
953 |
-
use_reentrant=False,
|
954 |
-
)
|
955 |
-
|
956 |
-
else:
|
957 |
-
hidden_states, hidden_states2, residual = layer(
|
958 |
-
hidden_states,
|
959 |
-
hidden_states2,
|
960 |
-
residual,
|
961 |
-
attention_mask,
|
962 |
-
position_ids,
|
963 |
-
None,
|
964 |
-
is_padded_inputs,
|
965 |
-
output_attentions,
|
966 |
-
use_cache,
|
967 |
-
)
|
968 |
-
return hidden_states
|
969 |
-
|
970 |
-
|
971 |
-
class NomicBertPooler(nn.Module):
|
972 |
-
def __init__(self, config):
|
973 |
-
super().__init__()
|
974 |
-
self.dense = nn.Linear(config.n_embd, config.n_embd)
|
975 |
-
self.activation = nn.Tanh()
|
976 |
-
|
977 |
-
def forward(self, hidden_states, pool=True):
|
978 |
-
# We "pool" the model by simply taking the hidden state corresponding
|
979 |
-
# to the first token.
|
980 |
-
first_token_tensor = hidden_states[:, 0] if pool else hidden_states
|
981 |
-
pooled_output = self.dense(first_token_tensor)
|
982 |
-
pooled_output = self.activation(pooled_output)
|
983 |
-
return pooled_output
|
984 |
-
|
985 |
-
|
986 |
-
class NomicBertPredictionHeadTransform(nn.Module):
|
987 |
-
def __init__(self, config):
|
988 |
-
super().__init__()
|
989 |
-
self.dense = nn.Linear(config.n_embd, config.n_embd, bias=config.mlp_fc1_bias)
|
990 |
-
approximate = "tanh" if config.activation_function in ["gelu_new", "gelu_fast", "gelu_pytorch_tanh"] else "none"
|
991 |
-
if config.activation_function == "swiglu":
|
992 |
-
self.transform_act_fn = F.silu
|
993 |
-
else:
|
994 |
-
self.transform_act_fn = nn.GELU(approximate=approximate)
|
995 |
-
|
996 |
-
self.layer_norm = nn.LayerNorm(config.n_embd, eps=config.layer_norm_epsilon)
|
997 |
-
|
998 |
-
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
|
999 |
-
hidden_states = self.dense(hidden_states)
|
1000 |
-
hidden_states = self.transform_act_fn(hidden_states)
|
1001 |
-
hidden_states = self.layer_norm(hidden_states)
|
1002 |
-
|
1003 |
-
return hidden_states
|
1004 |
-
|
1005 |
-
|
1006 |
-
class NomicBertLMPredictionHead(nn.Module):
|
1007 |
-
def __init__(self, config):
|
1008 |
-
super().__init__()
|
1009 |
-
|
1010 |
-
self.transform = NomicBertPredictionHeadTransform(config)
|
1011 |
-
|
1012 |
-
self.decoder = nn.Linear(config.n_embd, config.vocab_size, bias=config.mlp_fc1_bias)
|
1013 |
-
|
1014 |
-
def forward(self, hidden_states):
|
1015 |
-
hidden_states = self.transform(hidden_states)
|
1016 |
-
hidden_states = self.decoder(hidden_states)
|
1017 |
-
return hidden_states
|
1018 |
-
|
1019 |
-
|
1020 |
-
class NomicBertPreTrainingHeads(nn.Module):
|
1021 |
-
def __init__(self, config):
|
1022 |
-
super().__init__()
|
1023 |
-
self.predictions = NomicBertLMPredictionHead(config)
|
1024 |
-
|
1025 |
-
def forward(self, sequence_output):
|
1026 |
-
prediction_scores = self.predictions(sequence_output)
|
1027 |
-
return prediction_scores
|
1028 |
-
|
1029 |
-
|
1030 |
-
class NomicBertModel(NomicBertPreTrainedModel):
|
1031 |
-
def __init__(self, config: GPT2Config, add_pooling_layer=True):
|
1032 |
-
super().__init__(config)
|
1033 |
-
self.pad_vocab_size_multiple = getattr(config, "pad_vocab_size_multiple", 1)
|
1034 |
-
if config.vocab_size % self.pad_vocab_size_multiple != 0:
|
1035 |
-
config.vocab_size += self.pad_vocab_size_multiple - (config.vocab_size % self.pad_vocab_size_multiple)
|
1036 |
-
|
1037 |
-
assert config.activation_function in [
|
1038 |
-
"gelu",
|
1039 |
-
"gelu_new",
|
1040 |
-
"gelu_fast",
|
1041 |
-
"gelu_pytorch_tanh",
|
1042 |
-
"swiglu",
|
1043 |
-
"geglu",
|
1044 |
-
"glu",
|
1045 |
-
]
|
1046 |
-
|
1047 |
-
self.embeddings = NomicBertEmbeddings(config)
|
1048 |
-
self.emb_drop = nn.Dropout(config.resid_pdrop)
|
1049 |
-
self.emb_ln = nn.LayerNorm(config.n_embd, eps=config.layer_norm_epsilon)
|
1050 |
-
self.encoder = NomicBertEncoder(config)
|
1051 |
-
self.pooler = NomicBertPooler(config) if add_pooling_layer else None
|
1052 |
-
|
1053 |
-
self.apply(partial(_init_weights, initializer_range=config.initializer_range))
|
1054 |
-
|
1055 |
-
def forward(
|
1056 |
-
self,
|
1057 |
-
input_ids,
|
1058 |
-
position_ids=None,
|
1059 |
-
token_type_ids=None,
|
1060 |
-
attention_mask=None,
|
1061 |
-
return_dict=None,
|
1062 |
-
):
|
1063 |
-
if token_type_ids is None:
|
1064 |
-
token_type_ids = torch.zeros_like(input_ids)
|
1065 |
-
hidden_states = self.embeddings(input_ids, position_ids=position_ids, token_type_ids=token_type_ids)
|
1066 |
-
hidden_states = self.emb_ln(hidden_states)
|
1067 |
-
hidden_states = self.emb_drop(hidden_states)
|
1068 |
-
|
1069 |
-
attention_mask = self.get_extended_attention_mask(attention_mask, input_ids.shape)
|
1070 |
-
sequence_output = self.encoder(hidden_states, attention_mask=attention_mask, return_dict=return_dict)
|
1071 |
-
|
1072 |
-
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
|
1073 |
-
|
1074 |
-
return BaseModelOutputWithPoolingAndCrossAttentions(
|
1075 |
-
last_hidden_state=sequence_output,
|
1076 |
-
pooler_output=pooled_output,
|
1077 |
-
)
|
1078 |
-
|
1079 |
-
|
1080 |
-
class NomicBertForPreTraining(NomicBertPreTrainedModel):
|
1081 |
-
_tied_weights_keys = ["predictions.decoder.bias", "cls.predictions.decoder.weight"]
|
1082 |
-
|
1083 |
-
def __init__(self, config: GPT2Config):
|
1084 |
-
super().__init__(config)
|
1085 |
-
|
1086 |
-
self.bert = NomicBertModel(config, add_pooling_layer=getattr(config, "add_pooling_layer", False))
|
1087 |
-
self.cls = NomicBertPreTrainingHeads(config)
|
1088 |
-
self.mlm_loss = nn.CrossEntropyLoss()
|
1089 |
-
|
1090 |
-
# Initialize weights and apply final processing
|
1091 |
-
self.apply(partial(_init_weights, initializer_range=config.initializer_range))
|
1092 |
-
self.tie_weights()
|
1093 |
-
|
1094 |
-
def tie_weights(self):
|
1095 |
-
self.cls.predictions.decoder.weight = self.bert.embeddings.word_embeddings.weight
|
1096 |
-
|
1097 |
-
def forward(
|
1098 |
-
self,
|
1099 |
-
input_ids,
|
1100 |
-
position_ids=None,
|
1101 |
-
token_type_ids=None,
|
1102 |
-
attention_mask=None,
|
1103 |
-
labels=None,
|
1104 |
-
):
|
1105 |
-
"""
|
1106 |
-
If labels are provided, they must be -100 for masked out tokens (as specified in the attention
|
1107 |
-
mask).
|
1108 |
-
Outputs:
|
1109 |
-
if `labels` and `next_sentence_label` are not `None`:
|
1110 |
-
Outputs the total_loss which is the sum of the masked language modeling loss and the next
|
1111 |
-
sentence classification loss.
|
1112 |
-
if `labels` or `next_sentence_label` is `None`:
|
1113 |
-
Outputs a tuple comprising
|
1114 |
-
- the masked language modeling logits of shape [batch_size, sequence_length, vocab_size], and
|
1115 |
-
- the next sentence classification logits of shape [batch_size, 2].
|
1116 |
-
|
1117 |
-
"""
|
1118 |
-
outputs = self.bert(
|
1119 |
-
input_ids,
|
1120 |
-
position_ids=position_ids,
|
1121 |
-
token_type_ids=token_type_ids,
|
1122 |
-
attention_mask=attention_mask.bool() if attention_mask is not None else None,
|
1123 |
-
)
|
1124 |
-
sequence_output, _ = outputs.last_hidden_state, outputs.pooler_output
|
1125 |
-
|
1126 |
-
prediction_scores = self.cls(sequence_output)
|
1127 |
-
|
1128 |
-
total_loss = None
|
1129 |
-
if labels is not None:
|
1130 |
-
masked_lm_loss = self.mlm_loss(
|
1131 |
-
rearrange(prediction_scores, "... v -> (...) v"),
|
1132 |
-
rearrange(labels, "... -> (...)"),
|
1133 |
-
)
|
1134 |
-
total_loss = masked_lm_loss.float()
|
1135 |
-
|
1136 |
-
return MaskedLMOutput(
|
1137 |
-
loss=total_loss,
|
1138 |
-
logits=prediction_scores,
|
1139 |
-
hidden_states=outputs.hidden_states,
|
1140 |
-
attentions=None,
|
1141 |
-
)
|
1142 |
-
|
1143 |
-
|
1144 |
-
class NomicBertForSequenceClassification(NomicBertPreTrainedModel):
|
1145 |
-
def __init__(self, config):
|
1146 |
-
super().__init__(config)
|
1147 |
-
self.num_labels = config.num_labels
|
1148 |
-
self.config = config
|
1149 |
-
|
1150 |
-
self.bert = NomicBertModel(config)
|
1151 |
-
classifier_dropout = getattr(config, "classifier_dropout", config.embd_pdrop)
|
1152 |
-
self.dropout = nn.Dropout(classifier_dropout)
|
1153 |
-
self.classifier = nn.Linear(config.n_embd, config.num_labels)
|
1154 |
-
|
1155 |
-
# Initialize weights and apply final processing
|
1156 |
-
self.post_init()
|
1157 |
-
|
1158 |
-
def forward(
|
1159 |
-
self,
|
1160 |
-
input_ids: Optional[torch.Tensor] = None,
|
1161 |
-
attention_mask: Optional[torch.Tensor] = None,
|
1162 |
-
token_type_ids: Optional[torch.Tensor] = None,
|
1163 |
-
position_ids: Optional[torch.Tensor] = None,
|
1164 |
-
head_mask: Optional[torch.Tensor] = None,
|
1165 |
-
inputs_embeds: Optional[torch.Tensor] = None,
|
1166 |
-
labels: Optional[torch.Tensor] = None,
|
1167 |
-
output_attentions: Optional[bool] = None,
|
1168 |
-
output_hidden_states: Optional[bool] = None,
|
1169 |
-
return_dict: Optional[bool] = None,
|
1170 |
-
):
|
1171 |
-
r"""
|
1172 |
-
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
|
1173 |
-
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
|
1174 |
-
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
|
1175 |
-
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
|
1176 |
-
"""
|
1177 |
-
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
|
1178 |
-
outputs = self.bert(
|
1179 |
-
input_ids,
|
1180 |
-
position_ids=position_ids,
|
1181 |
-
token_type_ids=token_type_ids,
|
1182 |
-
attention_mask=attention_mask.bool() if attention_mask is not None else None,
|
1183 |
-
)
|
1184 |
-
|
1185 |
-
pooled_output = outputs[1]
|
1186 |
-
|
1187 |
-
pooled_output = self.dropout(pooled_output)
|
1188 |
-
logits = self.classifier(pooled_output)
|
1189 |
-
|
1190 |
-
loss = None
|
1191 |
-
if labels is not None:
|
1192 |
-
if self.config.problem_type is None:
|
1193 |
-
if self.num_labels == 1:
|
1194 |
-
self.config.problem_type = "regression"
|
1195 |
-
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
|
1196 |
-
self.config.problem_type = "single_label_classification"
|
1197 |
-
else:
|
1198 |
-
self.config.problem_type = "multi_label_classification"
|
1199 |
-
|
1200 |
-
if self.config.problem_type == "regression":
|
1201 |
-
loss_fct = nn.MSELoss()
|
1202 |
-
if self.num_labels == 1:
|
1203 |
-
loss = loss_fct(logits.squeeze(), labels.squeeze())
|
1204 |
-
else:
|
1205 |
-
loss = loss_fct(logits, labels)
|
1206 |
-
elif self.config.problem_type == "single_label_classification":
|
1207 |
-
loss_fct = nn.CrossEntropyLoss()
|
1208 |
-
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
|
1209 |
-
elif self.config.problem_type == "multi_label_classification":
|
1210 |
-
loss_fct = nn.BCEWithLogitsLoss()
|
1211 |
-
loss = loss_fct(logits, labels)
|
1212 |
-
if not return_dict:
|
1213 |
-
output = (logits,) + outputs[2:]
|
1214 |
-
return ((loss,) + output) if loss is not None else output
|
1215 |
-
|
1216 |
-
return SequenceClassifierOutput(
|
1217 |
-
loss=loss,
|
1218 |
-
logits=logits,
|
1219 |
-
hidden_states=outputs.hidden_states,
|
1220 |
-
attentions=outputs.attentions,
|
1221 |
-
)
|
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