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File size: 25,388 Bytes
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[2024-04-16 21:08:14,944][__main__][INFO] - Found GPU with device_name NVIDIA GeForce RTX 2060. Will run RFdiffusion on NVIDIA GeForce RTX 2060
[2024-04-16 21:08:14,946][rfdiffusion.inference.model_runners][INFO] - Reading checkpoint from models/Complex_beta_ckpt.pt
[2024-04-16 21:08:19,223][rfdiffusion.inference.model_runners][INFO] - Loading checkpoint.
[2024-04-16 21:08:25,121][rfdiffusion.diffusion][INFO] - Using cached IGSO3.
[2024-04-16 21:08:25,152][__main__][INFO] - Making design testoutputs/binder_test_0
[2024-04-16 21:08:25,177][rfdiffusion.inference.model_runners][INFO] - Using contig: ['A24-226/0 100-100']
[2024-04-16 21:08:25,247][rfdiffusion.inference.model_runners][INFO] - Sequence init: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:08:35,479][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:08:35,486][rfdiffusion.inference.model_runners][INFO] - Timestep 50, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:08:39,847][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:08:39,852][rfdiffusion.inference.model_runners][INFO] - Timestep 49, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:08:44,141][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:08:44,147][rfdiffusion.inference.model_runners][INFO] - Timestep 48, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:08:48,389][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:08:48,394][rfdiffusion.inference.model_runners][INFO] - Timestep 47, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:08:52,619][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:08:52,625][rfdiffusion.inference.model_runners][INFO] - Timestep 46, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:08:56,858][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:08:56,862][rfdiffusion.inference.model_runners][INFO] - Timestep 45, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:01,098][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:01,102][rfdiffusion.inference.model_runners][INFO] - Timestep 44, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:05,338][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:05,342][rfdiffusion.inference.model_runners][INFO] - Timestep 43, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:09,598][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:09,604][rfdiffusion.inference.model_runners][INFO] - Timestep 42, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:13,840][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:13,845][rfdiffusion.inference.model_runners][INFO] - Timestep 41, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:18,108][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:18,113][rfdiffusion.inference.model_runners][INFO] - Timestep 40, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:22,376][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:22,380][rfdiffusion.inference.model_runners][INFO] - Timestep 39, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:26,676][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:26,681][rfdiffusion.inference.model_runners][INFO] - Timestep 38, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:30,942][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:30,947][rfdiffusion.inference.model_runners][INFO] - Timestep 37, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:35,234][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:09:35,238][rfdiffusion.inference.model_runners][INFO] - Timestep 36, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:39,533][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:09:39,538][rfdiffusion.inference.model_runners][INFO] - Timestep 35, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:43,834][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:09:43,839][rfdiffusion.inference.model_runners][INFO] - Timestep 34, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:48,263][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:09:48,269][rfdiffusion.inference.model_runners][INFO] - Timestep 33, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:53,373][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:09:53,378][rfdiffusion.inference.model_runners][INFO] - Timestep 32, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:09:58,349][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:09:58,355][rfdiffusion.inference.model_runners][INFO] - Timestep 31, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:03,473][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:03,479][rfdiffusion.inference.model_runners][INFO] - Timestep 30, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:08,467][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:08,473][rfdiffusion.inference.model_runners][INFO] - Timestep 29, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:13,543][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:13,549][rfdiffusion.inference.model_runners][INFO] - Timestep 28, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:18,523][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:10:18,528][rfdiffusion.inference.model_runners][INFO] - Timestep 27, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:23,560][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:23,565][rfdiffusion.inference.model_runners][INFO] - Timestep 26, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:28,535][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:28,541][rfdiffusion.inference.model_runners][INFO] - Timestep 25, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:33,560][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:33,566][rfdiffusion.inference.model_runners][INFO] - Timestep 24, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:38,550][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:38,556][rfdiffusion.inference.model_runners][INFO] - Timestep 23, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:43,620][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:10:43,625][rfdiffusion.inference.model_runners][INFO] - Timestep 22, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:48,607][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:48,611][rfdiffusion.inference.model_runners][INFO] - Timestep 21, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:53,651][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:10:53,656][rfdiffusion.inference.model_runners][INFO] - Timestep 20, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:10:58,629][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:10:58,634][rfdiffusion.inference.model_runners][INFO] - Timestep 19, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:03,686][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:03,692][rfdiffusion.inference.model_runners][INFO] - Timestep 18, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:08,664][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:08,669][rfdiffusion.inference.model_runners][INFO] - Timestep 17, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:13,718][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:13,722][rfdiffusion.inference.model_runners][INFO] - Timestep 16, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:18,697][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.12
[2024-04-16 21:11:18,701][rfdiffusion.inference.model_runners][INFO] - Timestep 15, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:23,732][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:23,738][rfdiffusion.inference.model_runners][INFO] - Timestep 14, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:28,728][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:28,731][rfdiffusion.inference.model_runners][INFO] - Timestep 13, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:33,762][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:33,767][rfdiffusion.inference.model_runners][INFO] - Timestep 12, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:38,737][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:38,746][rfdiffusion.inference.model_runners][INFO] - Timestep 11, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:43,823][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:43,830][rfdiffusion.inference.model_runners][INFO] - Timestep 10, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:48,822][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:48,827][rfdiffusion.inference.model_runners][INFO] - Timestep 9, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:53,862][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:53,867][rfdiffusion.inference.model_runners][INFO] - Timestep 8, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:11:58,870][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:11:58,875][rfdiffusion.inference.model_runners][INFO] - Timestep 7, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:12:03,919][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:12:03,924][rfdiffusion.inference.model_runners][INFO] - Timestep 6, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:12:08,909][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:12:08,917][rfdiffusion.inference.model_runners][INFO] - Timestep 5, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:12:14,001][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:12:14,005][rfdiffusion.inference.model_runners][INFO] - Timestep 4, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:12:19,010][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:12:19,014][rfdiffusion.inference.model_runners][INFO] - Timestep 3, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:12:24,079][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.11
[2024-04-16 21:12:24,083][rfdiffusion.inference.model_runners][INFO] - Timestep 2, input to next step: ----------------------------------------------------------------------------------------------------RTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHKDTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAA
[2024-04-16 21:12:38,119][__main__][INFO] - Finished design in 4.22 minutes
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