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Runtime error
Runtime error
| [2023-09-23 16:18:02,629][__main__][INFO] - Found GPU with device_name NVIDIA GeForce RTX 2060. Will run RFdiffusion on NVIDIA GeForce RTX 2060 | |
| [2023-09-23 16:18:02,631][rfdiffusion.inference.model_runners][INFO] - Reading checkpoint from C:\Users\adminisiterlator\RFdiffusion\rfdiffusion\inference/../../models/Base_ckpt.pt | |
| [2023-09-23 16:18:09,253][rfdiffusion.inference.model_runners][INFO] - Loading checkpoint. | |
| [2023-09-23 16:18:18,230][rfdiffusion.diffusion][INFO] - Using cached IGSO3. | |
| [2023-09-23 16:18:18,279][__main__][INFO] - Making design testoutputs/binder_test_0 | |
| [2023-09-23 16:18:18,322][rfdiffusion.inference.model_runners][INFO] - Using contig: ['A1-250/0 150-150'] | |
| [2023-09-23 16:18:18,478][rfdiffusion.inference.model_runners][INFO] - Sequence init: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:18:33,914][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.79 | |
| [2023-09-23 16:18:33,937][rfdiffusion.inference.model_runners][INFO] - Timestep 50, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:18:44,248][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.57 | |
| [2023-09-23 16:18:44,258][rfdiffusion.inference.model_runners][INFO] - Timestep 49, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:18:54,349][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.59 | |
| [2023-09-23 16:18:54,357][rfdiffusion.inference.model_runners][INFO] - Timestep 48, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:19:03,798][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.55 | |
| [2023-09-23 16:19:03,809][rfdiffusion.inference.model_runners][INFO] - Timestep 47, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:19:15,098][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.53 | |
| [2023-09-23 16:19:15,117][rfdiffusion.inference.model_runners][INFO] - Timestep 46, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:19:28,081][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:19:28,148][rfdiffusion.inference.model_runners][INFO] - Timestep 45, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:19:41,207][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:19:41,218][rfdiffusion.inference.model_runners][INFO] - Timestep 44, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:19:54,337][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:19:54,349][rfdiffusion.inference.model_runners][INFO] - Timestep 43, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:20:07,887][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:20:07,898][rfdiffusion.inference.model_runners][INFO] - Timestep 42, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:20:21,500][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.53 | |
| [2023-09-23 16:20:21,512][rfdiffusion.inference.model_runners][INFO] - Timestep 41, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:20:35,249][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.56 | |
| [2023-09-23 16:20:35,261][rfdiffusion.inference.model_runners][INFO] - Timestep 40, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:20:48,788][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.53 | |
| [2023-09-23 16:20:48,801][rfdiffusion.inference.model_runners][INFO] - Timestep 39, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:21:02,351][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.50 | |
| [2023-09-23 16:21:02,368][rfdiffusion.inference.model_runners][INFO] - Timestep 38, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:21:16,531][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.53 | |
| [2023-09-23 16:21:16,545][rfdiffusion.inference.model_runners][INFO] - Timestep 37, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:21:30,036][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.52 | |
| [2023-09-23 16:21:30,046][rfdiffusion.inference.model_runners][INFO] - Timestep 36, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:21:43,625][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:21:43,641][rfdiffusion.inference.model_runners][INFO] - Timestep 35, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:21:57,541][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:21:57,558][rfdiffusion.inference.model_runners][INFO] - Timestep 34, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:22:10,859][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.53 | |
| [2023-09-23 16:22:10,873][rfdiffusion.inference.model_runners][INFO] - Timestep 33, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:22:24,099][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.53 | |
| [2023-09-23 16:22:24,120][rfdiffusion.inference.model_runners][INFO] - Timestep 32, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:22:37,304][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.55 | |
| [2023-09-23 16:22:37,313][rfdiffusion.inference.model_runners][INFO] - Timestep 31, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:22:50,568][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.60 | |
| [2023-09-23 16:22:50,585][rfdiffusion.inference.model_runners][INFO] - Timestep 30, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:23:03,903][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.57 | |
| [2023-09-23 16:23:03,917][rfdiffusion.inference.model_runners][INFO] - Timestep 29, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:23:17,100][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.58 | |
| [2023-09-23 16:23:17,113][rfdiffusion.inference.model_runners][INFO] - Timestep 28, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:23:30,281][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.59 | |
| [2023-09-23 16:23:30,291][rfdiffusion.inference.model_runners][INFO] - Timestep 27, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:23:43,384][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.55 | |
| [2023-09-23 16:23:43,398][rfdiffusion.inference.model_runners][INFO] - Timestep 26, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:23:56,523][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.55 | |
| [2023-09-23 16:23:56,535][rfdiffusion.inference.model_runners][INFO] - Timestep 25, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:24:09,779][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:24:09,789][rfdiffusion.inference.model_runners][INFO] - Timestep 24, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:24:23,006][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.56 | |
| [2023-09-23 16:24:23,020][rfdiffusion.inference.model_runners][INFO] - Timestep 23, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:24:36,259][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.54 | |
| [2023-09-23 16:24:36,270][rfdiffusion.inference.model_runners][INFO] - Timestep 22, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:24:49,501][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.51 | |
| [2023-09-23 16:24:49,518][rfdiffusion.inference.model_runners][INFO] - Timestep 21, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:25:02,826][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.50 | |
| [2023-09-23 16:25:02,838][rfdiffusion.inference.model_runners][INFO] - Timestep 20, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:25:16,143][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.48 | |
| [2023-09-23 16:25:16,151][rfdiffusion.inference.model_runners][INFO] - Timestep 19, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:25:29,499][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.49 | |
| [2023-09-23 16:25:29,513][rfdiffusion.inference.model_runners][INFO] - Timestep 18, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:25:42,747][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.50 | |
| [2023-09-23 16:25:42,760][rfdiffusion.inference.model_runners][INFO] - Timestep 17, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:25:56,014][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.52 | |
| [2023-09-23 16:25:56,027][rfdiffusion.inference.model_runners][INFO] - Timestep 16, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:26:09,318][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.55 | |
| [2023-09-23 16:26:09,331][rfdiffusion.inference.model_runners][INFO] - Timestep 15, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:26:22,569][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.59 | |
| [2023-09-23 16:26:22,581][rfdiffusion.inference.model_runners][INFO] - Timestep 14, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:26:35,873][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.61 | |
| [2023-09-23 16:26:35,884][rfdiffusion.inference.model_runners][INFO] - Timestep 13, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:26:49,295][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.66 | |
| [2023-09-23 16:26:49,466][rfdiffusion.inference.model_runners][INFO] - Timestep 12, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:27:02,321][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.72 | |
| [2023-09-23 16:27:02,340][rfdiffusion.inference.model_runners][INFO] - Timestep 11, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:27:14,014][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.73 | |
| [2023-09-23 16:27:14,026][rfdiffusion.inference.model_runners][INFO] - Timestep 10, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:27:25,398][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.74 | |
| [2023-09-23 16:27:25,410][rfdiffusion.inference.model_runners][INFO] - Timestep 9, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:27:36,972][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.69 | |
| [2023-09-23 16:27:36,985][rfdiffusion.inference.model_runners][INFO] - Timestep 8, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:27:48,874][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.69 | |
| [2023-09-23 16:27:48,888][rfdiffusion.inference.model_runners][INFO] - Timestep 7, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:28:00,365][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.75 | |
| [2023-09-23 16:28:00,379][rfdiffusion.inference.model_runners][INFO] - Timestep 6, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:28:11,944][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.81 | |
| [2023-09-23 16:28:11,955][rfdiffusion.inference.model_runners][INFO] - Timestep 5, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:28:23,255][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.85 | |
| [2023-09-23 16:28:23,277][rfdiffusion.inference.model_runners][INFO] - Timestep 4, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:28:34,608][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.85 | |
| [2023-09-23 16:28:34,621][rfdiffusion.inference.model_runners][INFO] - Timestep 3, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:28:45,940][rfdiffusion.inference.utils][INFO] - Sampled motif RMSD: 0.88 | |
| [2023-09-23 16:28:45,954][rfdiffusion.inference.model_runners][INFO] - Timestep 2, input to next step: ------------------------------------------------------------------------------------------------------------------------------------------------------MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRAWINPKEGCKVHVVFSTERYNPESLLQEGEGRLGKCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQLKNPLEIVSIPDNHGHIDPSLRLIWDLAFLGSSYVMWEMTTQVSHYYLAQLTSVRQWKTNDDTIDFDYTVLLHELSTQEIIPC | |
| [2023-09-23 16:29:18,719][__main__][INFO] - Finished design in 11.01 minutes | |