config/inference/symmetry.yaml

# Config for sampling symmetric assemblies.

defaults:
  - base

inference:
  # Symmetry to sample
  # Available symmetries:
  # - Cyclic symmetry (C_n) # call as c5
  # - Dihedral symmetry (D_n) # call as d5
  # - Tetrahedral symmetry # call as tetrahedral
  # - Octahedral symmetry # call as octahedral
  # - Icosahedral symmetry # call as icosahedral
  symmetry: c2

  # Set to true for computational efficiency 
  # to avoid memory overhead of modeling all subunits.
  model_only_neighbors: False

  # Output directory of samples.
  output_prefix: samples/c2

contigmap:
  # Specify a single integer value to sample unconditionally.
  # Must be evenly divisible by the number of chains in the symmetry.
  contigs: ['100']