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from pathlib import Path |
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import matplotlib.pyplot as plt |
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import numpy as np |
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import torch |
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from . import general |
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def fitness(x): |
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w = [0.0, 0.0, 0.1, 0.9] |
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return (x[:, :4] * w).sum(1) |
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def ap_per_class(tp, conf, pred_cls, target_cls, v5_metric=False, plot=False, save_dir='.', names=()): |
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""" Compute the average precision, given the recall and precision curves. |
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Source: https://github.com/rafaelpadilla/Object-Detection-Metrics. |
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# Arguments |
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tp: True positives (nparray, nx1 or nx10). |
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conf: Objectness value from 0-1 (nparray). |
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pred_cls: Predicted object classes (nparray). |
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target_cls: True object classes (nparray). |
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plot: Plot precision-recall curve at mAP@0.5 |
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save_dir: Plot save directory |
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# Returns |
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The average precision as computed in py-faster-rcnn. |
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""" |
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i = np.argsort(-conf) |
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tp, conf, pred_cls = tp[i], conf[i], pred_cls[i] |
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unique_classes = np.unique(target_cls) |
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nc = unique_classes.shape[0] |
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px, py = np.linspace(0, 1, 1000), [] |
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ap, p, r = np.zeros((nc, tp.shape[1])), np.zeros((nc, 1000)), np.zeros((nc, 1000)) |
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for ci, c in enumerate(unique_classes): |
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i = pred_cls == c |
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n_l = (target_cls == c).sum() |
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n_p = i.sum() |
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if n_p == 0 or n_l == 0: |
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continue |
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else: |
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fpc = (1 - tp[i]).cumsum(0) |
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tpc = tp[i].cumsum(0) |
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recall = tpc / (n_l + 1e-16) |
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r[ci] = np.interp(-px, -conf[i], recall[:, 0], left=0) |
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precision = tpc / (tpc + fpc) |
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p[ci] = np.interp(-px, -conf[i], precision[:, 0], left=1) |
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for j in range(tp.shape[1]): |
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ap[ci, j], mpre, mrec = compute_ap(recall[:, j], precision[:, j], v5_metric=v5_metric) |
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if plot and j == 0: |
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py.append(np.interp(px, mrec, mpre)) |
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f1 = 2 * p * r / (p + r + 1e-16) |
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if plot: |
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plot_pr_curve(px, py, ap, Path(save_dir) / 'PR_curve.png', names) |
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plot_mc_curve(px, f1, Path(save_dir) / 'F1_curve.png', names, ylabel='F1') |
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plot_mc_curve(px, p, Path(save_dir) / 'P_curve.png', names, ylabel='Precision') |
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plot_mc_curve(px, r, Path(save_dir) / 'R_curve.png', names, ylabel='Recall') |
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i = f1.mean(0).argmax() |
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return p[:, i], r[:, i], ap, f1[:, i], unique_classes.astype('int32') |
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def compute_ap(recall, precision, v5_metric=False): |
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""" Compute the average precision, given the recall and precision curves |
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# Arguments |
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recall: The recall curve (list) |
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precision: The precision curve (list) |
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v5_metric: Assume maximum recall to be 1.0, as in YOLOv5, MMDetetion etc. |
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# Returns |
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Average precision, precision curve, recall curve |
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""" |
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if v5_metric: |
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mrec = np.concatenate(([0.], recall, [1.0])) |
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else: |
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mrec = np.concatenate(([0.], recall, [recall[-1] + 0.01])) |
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mpre = np.concatenate(([1.], precision, [0.])) |
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mpre = np.flip(np.maximum.accumulate(np.flip(mpre))) |
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method = 'interp' |
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if method == 'interp': |
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x = np.linspace(0, 1, 101) |
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ap = np.trapz(np.interp(x, mrec, mpre), x) |
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else: |
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i = np.where(mrec[1:] != mrec[:-1])[0] |
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ap = np.sum((mrec[i + 1] - mrec[i]) * mpre[i + 1]) |
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return ap, mpre, mrec |
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class ConfusionMatrix: |
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def __init__(self, nc, conf=0.25, iou_thres=0.45): |
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self.matrix = np.zeros((nc + 1, nc + 1)) |
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self.nc = nc |
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self.conf = conf |
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self.iou_thres = iou_thres |
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def process_batch(self, detections, labels): |
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""" |
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Return intersection-over-union (Jaccard index) of boxes. |
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Both sets of boxes are expected to be in (x1, y1, x2, y2) format. |
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Arguments: |
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detections (Array[N, 6]), x1, y1, x2, y2, conf, class |
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labels (Array[M, 5]), class, x1, y1, x2, y2 |
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Returns: |
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None, updates confusion matrix accordingly |
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""" |
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detections = detections[detections[:, 4] > self.conf] |
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gt_classes = labels[:, 0].int() |
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detection_classes = detections[:, 5].int() |
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iou = general.box_iou(labels[:, 1:], detections[:, :4]) |
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x = torch.where(iou > self.iou_thres) |
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if x[0].shape[0]: |
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matches = torch.cat((torch.stack(x, 1), iou[x[0], x[1]][:, None]), 1).cpu().numpy() |
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if x[0].shape[0] > 1: |
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matches = matches[matches[:, 2].argsort()[::-1]] |
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matches = matches[np.unique(matches[:, 1], return_index=True)[1]] |
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matches = matches[matches[:, 2].argsort()[::-1]] |
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matches = matches[np.unique(matches[:, 0], return_index=True)[1]] |
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else: |
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matches = np.zeros((0, 3)) |
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n = matches.shape[0] > 0 |
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m0, m1, _ = matches.transpose().astype(np.int16) |
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for i, gc in enumerate(gt_classes): |
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j = m0 == i |
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if n and sum(j) == 1: |
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self.matrix[gc, detection_classes[m1[j]]] += 1 |
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else: |
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self.matrix[self.nc, gc] += 1 |
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if n: |
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for i, dc in enumerate(detection_classes): |
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if not any(m1 == i): |
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self.matrix[dc, self.nc] += 1 |
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def matrix(self): |
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return self.matrix |
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def plot(self, save_dir='', names=()): |
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try: |
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import seaborn as sn |
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array = self.matrix / (self.matrix.sum(0).reshape(1, self.nc + 1) + 1E-6) |
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array[array < 0.005] = np.nan |
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fig = plt.figure(figsize=(12, 9), tight_layout=True) |
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sn.set(font_scale=1.0 if self.nc < 50 else 0.8) |
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labels = (0 < len(names) < 99) and len(names) == self.nc |
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sn.heatmap(array, annot=self.nc < 30, annot_kws={"size": 8}, cmap='Blues', fmt='.2f', square=True, |
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xticklabels=names + ['background FP'] if labels else "auto", |
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yticklabels=names + ['background FN'] if labels else "auto").set_facecolor((1, 1, 1)) |
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fig.axes[0].set_xlabel('True') |
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fig.axes[0].set_ylabel('Predicted') |
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fig.savefig(Path(save_dir) / 'confusion_matrix.png', dpi=250) |
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except Exception as e: |
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pass |
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def print(self): |
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for i in range(self.nc + 1): |
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print(' '.join(map(str, self.matrix[i]))) |
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def plot_pr_curve(px, py, ap, save_dir='pr_curve.png', names=()): |
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fig, ax = plt.subplots(1, 1, figsize=(9, 6), tight_layout=True) |
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py = np.stack(py, axis=1) |
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if 0 < len(names) < 21: |
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for i, y in enumerate(py.T): |
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ax.plot(px, y, linewidth=1, label=f'{names[i]} {ap[i, 0]:.3f}') |
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else: |
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ax.plot(px, py, linewidth=1, color='grey') |
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ax.plot(px, py.mean(1), linewidth=3, color='blue', label='all classes %.3f mAP@0.5' % ap[:, 0].mean()) |
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ax.set_xlabel('Recall') |
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ax.set_ylabel('Precision') |
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ax.set_xlim(0, 1) |
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ax.set_ylim(0, 1) |
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plt.legend(bbox_to_anchor=(1.04, 1), loc="upper left") |
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fig.savefig(Path(save_dir), dpi=250) |
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def plot_mc_curve(px, py, save_dir='mc_curve.png', names=(), xlabel='Confidence', ylabel='Metric'): |
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fig, ax = plt.subplots(1, 1, figsize=(9, 6), tight_layout=True) |
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if 0 < len(names) < 21: |
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for i, y in enumerate(py): |
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ax.plot(px, y, linewidth=1, label=f'{names[i]}') |
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else: |
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ax.plot(px, py.T, linewidth=1, color='grey') |
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y = py.mean(0) |
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ax.plot(px, y, linewidth=3, color='blue', label=f'all classes {y.max():.2f} at {px[y.argmax()]:.3f}') |
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ax.set_xlabel(xlabel) |
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ax.set_ylabel(ylabel) |
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ax.set_xlim(0, 1) |
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ax.set_ylim(0, 1) |
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plt.legend(bbox_to_anchor=(1.04, 1), loc="upper left") |
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fig.savefig(Path(save_dir), dpi=250) |
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