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Browse files- requirements.txt +6 -0
- task.py +167 -0
requirements.txt
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streamlit
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openai
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pydub
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requests
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task.py
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import streamlit as st
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import openai
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from pydub import AudioSegment
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import io
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import time
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# Set your OpenAI API key
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openai.api_key = "YOUR_API_KEY"
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# Function to summarize the transcript into medical sections
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def medical_summary(transcript):
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prompt = f"""
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Organize the following medical transcript into the predefined sections:
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Sections:
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1. Medical Specialty
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2. CHIEF COMPLAINT
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3. Purpose of visit
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4. HISTORY and Physical
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- PAST MEDICAL HISTORY
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- PAST SURGICAL HISTORY
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- ALLERGIES History
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- Social History
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- REVIEW OF SYSTEMS
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5. PHYSICAL EXAMINATION
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- GENERAL
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- Vitals
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- ENT
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- Head
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- Neck
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- Chest
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- Heart
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- Abdomen
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- Pelvic
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- Extremities
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Transcript:
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{transcript}
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Provide a structured summary in the above format.
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"""
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try:
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response = openai.ChatCompletion.create(
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model="gpt-4", # Use gpt-3.5-turbo if GPT-4 is unavailable
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messages=[
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{"role": "system", "content": "You are a helpful medical assistant."},
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{"role": "user", "content": prompt}
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],
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temperature=0.5,
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max_tokens=3000 # Adjust max_tokens based on the expected size of the summary
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)
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structured_summary = response['choices'][0]['message']['content'].strip()
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return structured_summary
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except Exception as e:
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return f"An error occurred: {e}"
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# Function to convert audio to text using OpenAI's Whisper or any suitable service
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def transcribe_audio(audio_file):
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audio = AudioSegment.from_file(audio_file)
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audio = audio.set_channels(1).set_frame_rate(16000) # Convert to mono and set appropriate frame rate
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buffer = io.BytesIO()
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audio.export(buffer, format="wav")
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buffer.seek(0)
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# Here, you would normally call the transcription API or process the file
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# Example (assuming transcription API integration):
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# response = openai.Audio.transcribe(model="whisper-1", file=buffer)
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return "Patient complains of chest pain, shortness of breath, and dizziness. He has a history of hypertension."
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# Streamlit UI
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def main():
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# Custom CSS to improve UI aesthetics
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st.markdown("""
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<style>
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body {
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font-family: 'Arial', sans-serif;
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background-color: #f4f4f9;
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}
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.title {
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font-size: 36px;
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color: #1E2A47;
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font-weight: 600;
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text-align: center;
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padding-top: 30px;
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padding-bottom: 10px;
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}
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.subheader {
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font-size: 24px;
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color: #2F4F9A;
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text-align: center;
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margin-bottom: 20px;
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}
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.card {
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background-color: #ffffff;
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border-radius: 8px;
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box-shadow: 0 4px 8px rgba(0, 0, 0, 0.1);
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padding: 20px;
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margin-bottom: 30px;
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}
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.button {
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background-color: #4CAF50;
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color: white;
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padding: 12px 20px;
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font-size: 16px;
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border-radius: 8px;
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border: none;
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cursor: pointer;
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transition: background-color 0.3s ease;
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}
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.button:hover {
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background-color: #45a049;
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}
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.error {
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color: red;
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font-weight: bold;
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text-align: center;
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}
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.footer {
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text-align: center;
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margin-top: 40px;
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color: #555;
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}
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</style>
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""", unsafe_allow_html=True)
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# Title and subtitle
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st.markdown('<div class="title">Medical Transcription Dashboard</div>', unsafe_allow_html=True)
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st.markdown('<div class="subheader">Upload an audio file or enter the transcript to generate a medical summary</div>', unsafe_allow_html=True)
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# Layout: Input Area in Card
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with st.container():
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st.markdown('<div class="card">', unsafe_allow_html=True)
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# Audio upload and text input options
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audio_file = st.file_uploader("Upload an audio file (wav, mp3, etc.)", type=["wav", "mp3"], label_visibility="collapsed")
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transcript_text = st.text_area("Or, enter the transcript manually:", height=200)
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# Show "Generate Medical Summary" button
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if st.button("Generate Medical Summary", key="generate", use_container_width=True):
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if audio_file:
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# Show loading spinner while processing
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with st.spinner('Transcribing audio...'):
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transcript = transcribe_audio(audio_file)
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time.sleep(2) # Simulate delay
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st.write(f"Transcript: {transcript}")
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elif transcript_text:
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transcript = transcript_text
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else:
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st.markdown('<div class="error">Please upload an audio file or enter a transcript.</div>', unsafe_allow_html=True)
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if transcript:
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# Show loading spinner while generating summary
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with st.spinner('Generating Medical Summary...'):
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time.sleep(2) # Simulate processing time
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summary = medical_summary(transcript)
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st.markdown("### Medical Summary:")
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st.write(summary)
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st.markdown('</div>', unsafe_allow_html=True)
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# Footer
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st.markdown('<div class="footer">Developed with ❤️ by Your Company</div>', unsafe_allow_html=True)
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if __name__ == "__main__":
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main()
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