import streamlit as st import streamlit.components.v1 as components import pandas as pd import mols2grid from transformers import RobertaForCausalLM, RobertaTokenizer, pipeline # @st.cache(allow_output_mutation=False, hash_funcs={Tokenizer: str}) @st.cache(suppress_st_warning=True) def load_models(): model = RobertaForCausalLM.from_pretrained("gokceuludogan/ChemBERTaLM") return model def chembertalm_demo(): tokenizer = RobertaTokenizer.from_pretrained("gokceuludogan/ChemBERTaLM") model = load_models() generator = pipeline("text-generation", model=model, tokenizer=tokenizer) st.sidebar.subheader("Configurable parameters") num_mols = st.sidebar.number_input( "Number of generated molecules", min_value=0, max_value=200, value=20, help="The number of molecules to be generated.", ) max_new_tokens = st.sidebar.number_input( "Maximum length", min_value=0, max_value=1024, value=128, help="The maximum length of the sequence to be generated.", ) # temp = st.sidebar.slider( # "Temperature", # value=1.0, # min_value=0.1, # max_value=100.0, # help="The value used to module the next token probabilities.", # ) # top_k = st.sidebar.number_input( # "Top k", # value=10, # help="The number of highest probability vocabulary tokens to keep for top-k-filtering.", # ) # top_p = st.sidebar.number_input( # "Top p", # value=0.95, # help=" If set to float < 1, only the most probable tokens with probabilities that add up to top_p or higher are kept for generation.", # ) do_sample = st.sidebar.selectbox( "Sampling?", (True, False), help="Whether or not to use sampling; use beam decoding otherwise.", ) # num_beams = st.sidebar.number_input( # "Number of beams", # min_value=0, # max_value=20, # value=0, # help="The number of beams to use for beam search.", # ) # num_beams = None if do_sample is True else int(num_mols) # repetition_penalty = st.sidebar.number_input( # "Repetition Penalty", # min_value=0.0, # value=3.0, # step=0.1, # help="The parameter for repetition penalty. 1.0 means no penalty", # ) # no_repeat_ngram_size = st.sidebar.number_input( # "No Repeat N-Gram Size", # min_value=0, # value=3, # help="If set to int > 0, all ngrams of that size can only occur once.", # ) # target = st.text_input( # "Input Sequence", # "", # ) target = "" params = {'do_sample': do_sample, 'num_return_sequences': num_mols, 'max_length': max_new_tokens} outputs = generator(target, **params) output_smiles = [output["generated_text"] for output in outputs] st.write("### Generated Molecules") #st.write(output_smiles) df_smiles = pd.DataFrame({'SMILES': output_smiles}) #st.write(df_smiles) raw_html = mols2grid.display(df_smiles, mapping={"SMILES": "SMILES"})._repr_html_() components.html(raw_html, width=900, height=450, scrolling=True) st.markdown("## How to Generate") generation_code = f""" from transformers import RobertaForCausalLM, RobertaTokenizer, pipeline tokenizer = RobertaTokenizer.from_pretrained("gokceuludogan/ChemBERTaLM") model = RobertaForCausalLM.from_pretrained("gokceuludogan/ChemBERTaLM") generator = pipeline("text-generation", model=model, tokenizer=tokenizer) params = {params} outputs = generator("{target}", **params) output_smiles = [output["generated_text"] for output in outputs] """ st.code(textwrap.dedent(generation_code)) # textwrap.dedent("".join("Halletcez"))) st.set_page_config(page_title="ChemBERTaLM Demo", page_icon="✨", layout='wide') st.markdown("# ChemBERTaLM Demo") st.sidebar.header("ChemBERTaLM Demo") st.markdown( """ This demo illustrates ChemBERTaLM models' generation capabilities. Given a set of parameters, ChemBERTaLM generates a collection of molecules. Please configure parameters from the sidebar 👈 to generate molecules! See below for saving the output molecules and the code snippet generating them! """ ) chembertalm_demo()