How to do Zero-Shot Task: "in silico perturbation to determine transcription factor targets"?
#81
by
katarinayuan
- opened
Hi,
In case I missed anything, I notice that there is no code or data for the task "in silico perturbation to determine transcription factor targets". Could you please share it in the repo?
Thank you!
Thank you for your question. You can use the in silico perturber with emb_mode “cell_and_gene” to output gene embedding shifts in response to perturbations. The data for each analysis in the manuscript is all public data and can be obtained from the references in the manuscript.
ctheodoris
changed discussion status to
closed