metadata

license: mit
configs:
  - config_name: dataset
    data_files: dataset.csv

Description

Thermostability prediction is a regression task where each input protein x is mapped to a label y ∈ R, corresponding to the thermostability of x.

Splits

Structure type: AF2

The dataset is from FLIP: Benchmark tasks in fitness landscape inferencefor proteins. We employ all proteins from the“Human-cell”splits (proteins that lack AF2 structures are removed), and split them based on 70% structure similarity (see ProteinShake), with the number of training, validation and test set shown below:

Train: 5310
Valid: 706
Test: 706

Label

This label indicates the thermostability of the protein, ranging from 0 to 1.