Alvant
commited on
Commit
•
07cb357
1
Parent(s):
c81a939
add preproc notebooks
Browse files
preprocessing/MKB-generate-triplets.ipynb
ADDED
@@ -0,0 +1,363 @@
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1 |
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{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": 4,
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"metadata": {},
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"outputs": [],
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"source": [
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"from topicnet.cooking_machine import Dataset\n",
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"import pandas as pd\n",
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"\n",
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"dataset = Dataset('MKB10.csv', batch_vectorizer_path=\"./mkb_batches2\")\n",
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"\n",
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"data_orig = pd.read_pickle(\"MKB10.pkl\")\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 19,
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"metadata": {},
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"outputs": [],
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"source": [
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"data_orig.title = data_orig.title.str.replace(\" \", \"_\")\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 5,
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"{'@letter', '@ngram', '@text'}"
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]
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},
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"execution_count": 5,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"dataset.get_possible_modalities()"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": 6,
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"metadata": {},
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"outputs": [],
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"source": [
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"\n",
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"import numpy as np\n",
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"\n",
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"# all articles are from category \"Симптомы по алфавиту\", so threshold is 1\n",
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"THRESHOLD = 1\n",
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"\n",
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"def randomly_select(data_orig, point_a, should_intersect):\n",
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" attempts_left = 100\n",
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" while attempts_left > 0:\n",
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" rnd_idx_b = np.random.choice(data_orig.shape[0])\n",
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" point_b = data_orig.iloc[rnd_idx_b]\n",
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" intersection = set(point_b.categories) & set(point_a.categories)\n",
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" is_big = (len(intersection) > THRESHOLD)\n",
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" if should_intersect == is_big:\n",
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" # if is_big:\n",
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" # print(point_a.title, point_b.title, intersection)\n",
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" return point_b.title, rnd_idx_b, intersection\n",
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" attempts_left -= 1\n",
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" return None, None, None\n",
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"\n",
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"def generate_triplet(data_orig):\n",
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"\n",
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" rnd_idx_a = np.random.choice(data_orig.shape[0])\n",
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" point_a = data_orig.iloc[rnd_idx_a]\n",
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" point_b, rnd_idx_b, intersection = randomly_select(data_orig, point_a, should_intersect=True)\n",
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" point_c, rnd_idx_c, empty_intersection = randomly_select(data_orig, point_a, should_intersect=False)\n",
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" # return [point_a, point_b, point_c]\n",
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" return [point_a.title, point_b, point_c, intersection]\n",
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" # return [rnd_idx_a, rnd_idx_b, rnd_idx_c]\n",
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"\n",
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" \n",
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" "
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]
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},
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{
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"cell_type": "code",
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"execution_count": 21,
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"metadata": {},
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"outputs": [
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|██████████| 10000/10000 [00:57<00:00, 173.50it/s]\n"
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]
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},
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{
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"data": {
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"text/plain": [
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"7221"
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]
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},
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"execution_count": 21,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"from tqdm import tqdm\n",
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"\n",
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"triplets = []\n",
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"\n",
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"for i in tqdm(range(10000)):\n",
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" a, b, c, explanation = generate_triplet(data_orig)\n",
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" if b is not None and c is not None:\n",
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" triplets.append( (a, b, c, explanation) )\n",
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"\n",
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"len(triplets)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": 22,
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"metadata": {},
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"outputs": [],
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"source": [
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"import pickle\n",
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"\n",
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"with open(\"triplets_mkb.p\", \"wb\") as f:\n",
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" pickle.dump(triplets, f)\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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159 |
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"## Scoring model by ranking quality"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 23,
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"metadata": {},
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"outputs": [],
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"source": [
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168 |
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"from topicnet.cooking_machine.models import BaseScore as BaseTopicNetScore, TopicModel\n",
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"\n",
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"\n",
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"class ValidationRankingQuality(BaseTopicNetScore):\n",
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" def __init__(self, validation_dataset, triplets):\n",
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" super().__init__()\n",
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"\n",
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" self.validation_dataset = validation_dataset\n",
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" self.triplets = triplets\n",
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"\n",
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" def call(self, model: TopicModel):\n",
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179 |
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" theta = model.get_theta(dataset=self.validation_dataset)\n",
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" \n",
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" correct_rankings = 0\n",
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"\n",
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" for (a, b, c, _) in self.triplets:\n",
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184 |
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" # L1 distance, just for example\n",
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" similar_dist = sum(abs(theta[a] - theta[b]))\n",
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186 |
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" diffrnt_dist = sum(abs(theta[a] - theta[c]))\n",
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"\n",
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" correct_rankings += (similar_dist < diffrnt_dist)\n",
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"\n",
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" return correct_rankings / len(self.triplets)\n",
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"\n",
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" "
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]
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},
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{
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"cell_type": "code",
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"execution_count": 24,
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"metadata": {},
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"outputs": [],
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"source": [
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201 |
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"import artm\n",
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"\n",
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"artm_model = artm.ARTM(\n",
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" num_topics=20, \n",
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" dictionary=dataset.get_dictionary(),\n",
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" class_ids={'@lemmatized': 1, '@ngram': 50}, # absolute values, just for example\n",
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" theta_columns_naming=\"title\"\n",
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")\n",
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"\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 25,
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"metadata": {},
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"outputs": [],
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"source": [
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"tm = TopicModel(artm_model, custom_scores={\"ranking\": ValidationRankingQuality(dataset, triplets)})"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 26,
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"metadata": {
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"scrolled": true
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},
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"outputs": [],
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"source": [
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"tm._fit(dataset.get_batch_vectorizer(), 10)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": 27,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"0.641600886303836\n"
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]
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},
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{
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"data": {
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"text/plain": [
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"[<matplotlib.lines.Line2D at 0x7f133d31e8d0>]"
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]
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},
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"execution_count": 27,
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"metadata": {},
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"output_type": "execute_result"
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},
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{
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"data": {
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+
"image/png": 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\n",
|
264 |
+
"text/plain": [
|
265 |
+
"<Figure size 432x288 with 1 Axes>"
|
266 |
+
]
|
267 |
+
},
|
268 |
+
"metadata": {
|
269 |
+
"needs_background": "light"
|
270 |
+
},
|
271 |
+
"output_type": "display_data"
|
272 |
+
}
|
273 |
+
],
|
274 |
+
"source": [
|
275 |
+
"import matplotlib.pyplot as plt\n",
|
276 |
+
"%matplotlib inline\n",
|
277 |
+
"\n",
|
278 |
+
"print(tm.scores['ranking'][-1])\n",
|
279 |
+
"plt.plot(tm.scores['ranking'])"
|
280 |
+
]
|
281 |
+
},
|
282 |
+
{
|
283 |
+
"cell_type": "code",
|
284 |
+
"execution_count": null,
|
285 |
+
"metadata": {},
|
286 |
+
"outputs": [],
|
287 |
+
"source": []
|
288 |
+
},
|
289 |
+
{
|
290 |
+
"cell_type": "code",
|
291 |
+
"execution_count": 28,
|
292 |
+
"metadata": {},
|
293 |
+
"outputs": [],
|
294 |
+
"source": [
|
295 |
+
"theta = artm_model.transform(batch_vectorizer=dataset.get_batch_vectorizer())"
|
296 |
+
]
|
297 |
+
},
|
298 |
+
{
|
299 |
+
"cell_type": "code",
|
300 |
+
"execution_count": 30,
|
301 |
+
"metadata": {},
|
302 |
+
"outputs": [
|
303 |
+
{
|
304 |
+
"name": "stdout",
|
305 |
+
"output_type": "stream",
|
306 |
+
"text": [
|
307 |
+
"Асимптоматический_хронический_простатит Некротический_фасциит Болезнь_Галлервордена_—_Шпатца\n",
|
308 |
+
"{'Синдромы по алфавиту', 'Бактериальные инфекции'}\n",
|
309 |
+
"Листериоз Трихофития Дермацентороз\n",
|
310 |
+
"{'Инфекционные заболевания', 'Синдромы по алфавиту'}\n",
|
311 |
+
"Гестоз Маловодие Психогенное_переедание\n",
|
312 |
+
"{'Патология беременности', 'Синдромы по алфавиту'}\n"
|
313 |
+
]
|
314 |
+
}
|
315 |
+
],
|
316 |
+
"source": [
|
317 |
+
"for (a, b, c, explanation) in triplets[:10]:\n",
|
318 |
+
" # L1 distance, just for example\n",
|
319 |
+
" similar_dist = sum(abs(theta[a] - theta[b])) \n",
|
320 |
+
" diffrnt_dist = sum(abs(theta[a] - theta[c]))\n",
|
321 |
+
"\n",
|
322 |
+
" if (similar_dist > diffrnt_dist):\n",
|
323 |
+
" print(a, b, c)\n",
|
324 |
+
" print(explanation)\n"
|
325 |
+
]
|
326 |
+
},
|
327 |
+
{
|
328 |
+
"cell_type": "code",
|
329 |
+
"execution_count": null,
|
330 |
+
"metadata": {},
|
331 |
+
"outputs": [],
|
332 |
+
"source": []
|
333 |
+
},
|
334 |
+
{
|
335 |
+
"cell_type": "code",
|
336 |
+
"execution_count": null,
|
337 |
+
"metadata": {},
|
338 |
+
"outputs": [],
|
339 |
+
"source": []
|
340 |
+
}
|
341 |
+
],
|
342 |
+
"metadata": {
|
343 |
+
"kernelspec": {
|
344 |
+
"display_name": "Python 3",
|
345 |
+
"language": "python",
|
346 |
+
"name": "python3"
|
347 |
+
},
|
348 |
+
"language_info": {
|
349 |
+
"codemirror_mode": {
|
350 |
+
"name": "ipython",
|
351 |
+
"version": 3
|
352 |
+
},
|
353 |
+
"file_extension": ".py",
|
354 |
+
"mimetype": "text/x-python",
|
355 |
+
"name": "python",
|
356 |
+
"nbconvert_exporter": "python",
|
357 |
+
"pygments_lexer": "ipython3",
|
358 |
+
"version": "3.8.11"
|
359 |
+
}
|
360 |
+
},
|
361 |
+
"nbformat": 4,
|
362 |
+
"nbformat_minor": 2
|
363 |
+
}
|
preprocessing/MKB-obtain.ipynb
ADDED
The diff for this file is too large to render.
See raw diff
|
|