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DS.d18 | 17968352 | [
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DS.d19 | 17968676 | [
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DS.d20 | 17976762 | [
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DS.d21 | 18037312 | [
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DS.d22 | 18042181 | [
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DS.d29 | 18164165 | [
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DS.d30 | 18172601 | [
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DS.d31 | 18177531 | [
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DS.d32 | 18179560 | [
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DS.d33 | 18180755 | [
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DS.d34 | 18190985 | [
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DS.d35 | 18191451 | [
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DS.d36 | 18195714 | [
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DS.d37 | 18198986 | [
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DS.d46 | 18227836 | [
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DS.d47 | 18227838 | [
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DS.d48 | 18227970 | [
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DS.d49 | 18228136 | [
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DS.d65 | 18272254 | [
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DS.d66 | 18274872 | [
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},
{
"id": "DS.d66.s0.e3",
"type": "protein",
"text": [
"CAT"
],
"offsets": [
[
118,
121
]
],
"normalized": [
{
"db_name": "UniProt",
"db_id": "O62839"
},
{
"db_name": "UniProt",
"db_id": "O97492"
},
{
"db_name": "UniProt",
"db_id": "P00432"
},
{
"db_name": "UniProt",
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},
{
"db_name": "UniProt",
"db_id": "P00486"
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{
"db_name": "UniProt",
"db_id": "P00487"
},
{
"db_name": "UniProt",
"db_id": "P04040"
},
{
"db_name": "UniProt",
"db_id": "P06135"
},
{
"db_name": "UniProt",
"db_id": "P07641"
},
{
"db_name": "UniProt",
"db_id": "P11504"
},
{
"db_name": "UniProt",
"db_id": "P20074"
},
{
"db_name": "UniProt",
"db_id": "P22782"
},
{
"db_name": "UniProt",
"db_id": "P25309"
},
{
"db_name": "UniProt",
"db_id": "P25819"
},
{
"db_name": "UniProt",
"db_id": "P26825"
},
{
"db_name": "UniProt",
"db_id": "P26826"
},
{
"db_name": "UniProt",
"db_id": "P32796"
},
{
"db_name": "UniProt",
"db_id": "P36882"
},
{
"db_name": "UniProt",
"db_id": "P36883"
},
{
"db_name": "UniProt",
"db_id": "P43155"
},
{
"db_name": "UniProt",
"db_id": "P47934"
},
{
"db_name": "UniProt",
"db_id": "P49417"
},
{
"db_name": "UniProt",
"db_id": "P52826"
},
{
"db_name": "UniProt",
"db_id": "P58777"
},
{
"db_name": "UniProt",
"db_id": "P62577"
},
{
"db_name": "UniProt",
"db_id": "P62578"
},
{
"db_name": "UniProt",
"db_id": "P62579"
},
{
"db_name": "UniProt",
"db_id": "P62580"
},
{
"db_name": "UniProt",
"db_id": "P90682"
},
{
"db_name": "UniProt",
"db_id": "Q00614"
},
{
"db_name": "UniProt",
"db_id": "Q02736"
},
{
"db_name": "UniProt",
"db_id": "Q03058"
},
{
"db_name": "UniProt",
"db_id": "Q5RF10"
},
{
"db_name": "UniProt",
"db_id": "Q64405"
},
{
"db_name": "UniProt",
"db_id": "Q704S8"
},
{
"db_name": "UniProt",
"db_id": "Q9M5L6"
},
{
"db_name": "UniProt",
"db_id": "Q9PWF7"
}
]
}
] | [] | [] | [
{
"id": "DS.d66.s0.i0",
"type": "compound-protein-interaction",
"arg1_id": "DS.d66.s0.e0",
"arg2_id": "DS.d66.s0.e2",
"normalized": []
},
{
"id": "DS.d66.s0.i1",
"type": "compound-protein-interaction",
"arg1_id": "DS.d66.s0.e1",
"arg2_id": "DS.d66.s0.e3",
"normalized": []
},
{
"id": "DS.d66.s0.i2",
"type": "compound-protein-interaction",
"arg1_id": "DS.d66.s0.e1",
"arg2_id": "DS.d66.s0.e2",
"normalized": []
},
{
"id": "DS.d66.s0.i3",
"type": "compound-protein-interaction",
"arg1_id": "DS.d66.s0.e0",
"arg2_id": "DS.d66.s0.e3",
"normalized": []
}
] |
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Dataset Card for CPI
The compound-protein relationship (CPI) dataset consists of 2,613 sentences from abstracts containing annotations of proteins, small molecules, and their relationships.
Citation Information
@article{doring2020automated,
title={Automated recognition of functional compound-protein relationships in literature},
author={D{\"o}ring, Kersten and Qaseem, Ammar and Becer, Michael and Li, Jianyu and Mishra, Pankaj and Gao, Mingjie and Kirchner, Pascal and Sauter, Florian and Telukunta, Kiran K and Moumbock, Aur{\'e}lien FA and others},
journal={Plos one},
volume={15},
number={3},
pages={e0220925},
year={2020},
publisher={Public Library of Science San Francisco, CA USA}
}
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